Metadata-Version: 2.1
Name: biobricks
Version: 0.1.66
Summary: Biobricks automates bioinformatics data.
Project-URL: Homepage, https://github.com/biobricks-ai/biobricks
Project-URL: Bug Tracker, https://github.com/biobricks-ai/biobricks/issues
Author-email: "Jose A. Jaramillo" <jjv@utp.edu.co>, Thomas Luechtefeld <tom@insilica.co>
License-File: LICENSE
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.7
Requires-Dist: click
Requires-Dist: cloup~=2.0.0
Requires-Dist: dvc[all]
Requires-Dist: logger
Requires-Dist: pyarrow
Requires-Dist: pytest-cov
Description-Content-Type: text/markdown

# BioBricks
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BioBricks makes loading data from biological datasets easy.

```bash
pip install biobricks
```

# initialize
To get started configure biobricks with a path for bricks and a biobricks.ai token:
```
biobricks configure
> Choose path to store bricks: <input a local path>
> Input a token from biobricks.ai/token: <this is your access token>
```

# Install and Use Bricks

To install a brick the command line command:
```sh
> biobricks install tox21
```

You can then use the brick in python as below:
```python
import biobricks as bb
bb.assets('tox21') # get the paths for the 'tox21' brick
```

To list the bricks currently available visit [github.com/biobricks-ai](https://github.com/biobricks-ai)