Metadata-Version: 1.0
Name: meneco
Version: 1.4.3.1
Summary: Metabolic Network Completion. Compute minimal completions to your draft net with reactions from a repair net.
Home-page: http://bioasp.github.io/meneco/
Author: Sven Thiele
Author-email: sthiele78@gmail.com
License: GPLv3+
Description: Installation 
        ============
        
        
        You can install meneco by running::
        
        	$ pip install --user meneco
        
        On Linux the executable script can then be found in ``~/.local/bin``
        
        and on MacOS the script is under ``/Users/YOURUSERNAME/Library/Python/3.2/bin``.
        
        
        Usage
        =====
        
        Typical usage is::
        	
        	$ meneco.py draftnetwork.sbml repairnetwork.sbml seeds.sbml targets.sbml
        	
        For more options you can ask for help as follows::
        
        	$ meneco.py --h
        	    usage: meneco.py [-h] [--enumerate] draftnetwork repairnetwork seeds targets
        	
        	    positional arguments:
        	      draftnetwork   metabolic network in SBML format
        	      repairnetwork  metabolic network in SBML format
        	      seeds          seeds in SBML format
        	      targets        targets in SBML format
        	
        	    optional arguments:
        	      -h, --help     show this help message and exit
        	      --enumerate    enumerate all minimal completions
        
        
        Samples
        =======
        
        Sample files for the reconstruction of ectocarpus are available here: ectocyc.sbml_, metacyc_16-5.sbml_, seeds.sbml_, targets.sbml_
        
        .. _ectocyc.sbml: http://bioasp.github.io/downloads/samples/ectodata/ectocyc.sbml
        .. _metacyc_16-5.sbml: http://bioasp.github.io/downloads/samples/ectodata/metacyc_16-5.sbml
        .. _seeds.sbml: http://bioasp.github.io/downloads/samples/ectodata/seeds.sbml
        .. _targets.sbml: http://bioasp.github.io/downloads/samples/ectodata/targets.sbml
        
        
Platform: UNKNOWN
