VEP run statistics
| VEP version (API) | 104 (104) |
| Annotation sources | Cache: /data_local/2/Ensembl-vep_cache/homo_sapiens/104_GRCh38 |
| Species | homo_sapiens |
| Command line options | --cache --dir /data_local/2/Ensembl-vep_cache --everything --fasta /data_local/3/chrX_1_28000.fasta --fork --format vcf --input_file /data_local/1/snp.recalibrated_chrX_28000.vcf.gz --offline --output_file snp_annotated.vcf --verbose |
| Start time | 2021-12-21 09:36:22 |
| End time | 2021-12-21 09:36:23 |
| Run time | 1 seconds |
| Input file | /data_local/1/snp.recalibrated_chrX_28000.vcf.gz |
| Output file | snp_annotated.vcf |
General statistics
| Lines of input read | 27 |
| Variants processed | 27 |
| Variants filtered out | 0 |
| Novel / existing variants | - |
| Overlapped genes | 0 |
| Overlapped transcripts | 0 |
| Overlapped regulatory features | 0 |