README.md
setup.py
brainlit/__init__.py
brainlit.egg-info/PKG-INFO
brainlit.egg-info/SOURCES.txt
brainlit.egg-info/dependency_links.txt
brainlit.egg-info/requires.txt
brainlit.egg-info/top_level.txt
brainlit/algorithms/__init__.py
brainlit/algorithms/connect_fragments/__init__.py
brainlit/algorithms/connect_fragments/connect_fragments.py
brainlit/algorithms/connect_fragments/make_connections.py
brainlit/algorithms/generate_fragments/__init__.py
brainlit/algorithms/generate_fragments/adaptive_thresh.py
brainlit/algorithms/regression/__init__.py
brainlit/algorithms/regression/log_regression.py
brainlit/algorithms/regression/log_regression_segment.py
brainlit/plot/__init__.py
brainlit/plot/visualize.py
brainlit/preprocessing/__init__.py
brainlit/preprocessing/image_process.py
brainlit/preprocessing/preprocess.py
brainlit/preprocessing/features/__init__.py
brainlit/preprocessing/features/linear_features.py
brainlit/preprocessing/features/neighborhood.py
brainlit/utils/__init__.py
brainlit/utils/combine_swc_img.py
brainlit/utils/image_getters.py
brainlit/utils/ngl_pipeline.py
brainlit/utils/read_octree.py
brainlit/utils/read_swc.py
brainlit/utils/swc2neuroglancer.py
brainlit/utils/swc2voxel.py
tests/__init__.py
tests/test_adaptive_thresh.py