Mikado/__init__.py,sha256=wqdT4jclrPmLgNNoaEPv67i4Tppu74DAIYt4S6n4T6o,4596
Mikado/exceptions.py,sha256=vnfh_RQdkop4rOX2R4NEO2IJQtwQyXaf5uVpk-YpuEY,2274
Mikado/version.py,sha256=tculCdvWuRxUExjsPOTuue4UX_xDG16-KOORnAC8Kx0,30
Mikado/configuration/__init__.py,sha256=N5qyFsZDHh2QkzClnbh0OcdoUNS8WeACSQtomZeoWsU,3551
Mikado/configuration/configuration_blueprint.json,sha256=oct7q-AHwQK3XfRhJEi-lwvnjLrqQEy6JJd96l8BQhs,33112
Mikado/configuration/configurator.py,sha256=kKI2_hX8g_7gcrrPA1CIYXv0mcJenst47wW3c4Fh9AI,24291
Mikado/configuration/daijin_configurator.py,sha256=ofsAVr8LYsBJOhmwtApZEn9P0PEaEAeflJEUTKO-UoY,12327
Mikado/configuration/daijin_schema.json,sha256=C3a46MWsKeM3qTHWFpSGrr9oV6WxyvQFuTVJENJsRts,10952
Mikado/configuration/requirements_blueprint.json,sha256=jDnEREZdXEb8DADuGmAyAuy1ZbfWVThy_AQmsmDMmlk,1243
Mikado/configuration/scoring_blueprint.json,sha256=LhLCNSwb2tWTQ-JQWlZM6PxQexyRu2RYFHRJMtFAiFQ,1477
Mikado/configuration/scoring_files/athaliana_scoring.yaml,sha256=wdT9J977YE4fm1xqFyOqBNG70ZQi4TOSuq4q8bat_Nw,3284
Mikado/configuration/scoring_files/celegans_scoring.yaml,sha256=o7fqyskXhR1Kaocwt3gOWTs02KGOoH58j9Oe78uR7jQ,3335
Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml,sha256=5C_gNbPLc4OUJSbLmqyZnanPC_GoxJqSXG4SWAnZE0Y,3251
Mikado/configuration/scoring_files/hsapiens_scoring.yaml,sha256=B4FCf7NXJt5cXezKbHINQcLtN6ur_4WTdtgErqGPuiA,3120
Mikado/configuration/scoring_files/human.yaml,sha256=DJj0XbswIoM1FSZ1kROyURTcc7Yyegp79LcKsIuv1x8,2686
Mikado/configuration/scoring_files/insects.yaml,sha256=OIpWxtWwZs8AiSisXZUs1lxPBy-s_WL5qjocBw4hlQo,2193
Mikado/configuration/scoring_files/plants.yaml,sha256=D3Vijq4hZpTp6UWObsu1A0xPg65tctrOY3zhyAX_Cmk,3610
Mikado/configuration/scoring_files/scerevisiae.yaml,sha256=U87pN41Tm3k6oaXIfcsfP5XODOEyCbpP9bGdbKjqm0o,2387
Mikado/configuration/scoring_files/worm.yaml,sha256=3d94ABcvv86bLuE_NEvte5yRrH3KFzg7hhypxsd6QD4,2804
Mikado/daijin/__init__.py,sha256=TMhR3LxmPLbwr_gxjzFJngRdK80r44c29TJ9QhuV-Sw,25548
Mikado/daijin/example_config.yaml,sha256=1U-OtsV0CxbFCvu5P3IdUVEAfDfpZb3FW2i23M4mQYY,5339
Mikado/daijin/hpc.json,sha256=_IVoTWBFVxO8YN7J97fqSyCpbDEf0gZ_3mkupoqbSUA,168
Mikado/daijin/hpc.yaml,sha256=idrpAXBEKWeT5mhF-FonKdNCu5yy4sdwb00VjLQV7L0,102
Mikado/daijin/mikado.snakefile,sha256=UdnS3NMgS8NL6TZp-b-spKRilszXFckm8V-0Viz0VlU,11636
Mikado/daijin/tr.snakefile,sha256=6pnXEmsTwhcQ5TskLALpploQ1O1exjiK1l3fKg8Qixg,38239
Mikado/loci/__init__.py,sha256=3dIW7T95epdabQHEwcmO56s1LRr0lsknWoOpOYyIn_E,812
Mikado/loci/abstractlocus.py,sha256=uvnlhMpNHb4cqnUCogVM2loH5y27LCyTo7I1km_NYc0,55968
Mikado/loci/excluded.py,sha256=gaUAYSgyyFngAMBnLEKtGYKZ5Vj2RHlqmRkoI7Wr9hc,3141
Mikado/loci/locus.py,sha256=ZKPEwREm6-H-4tRtZAfGtMJvZCjtxxnXmvuhLnZo1CE,35839
Mikado/loci/monosublocus.py,sha256=pii5Wcb34S3Yeuy2bOYgg7G2FSb27lGx4EuoNgxg9bY,2729
Mikado/loci/monosublocusholder.py,sha256=GN3rni1LRsnh0QgEBjiMGnAvUgi_ZPXmgMotslwP_4Q,19337
Mikado/loci/reference_gene.py,sha256=eyTJnPmMiZW-7ZlquQai7rReg-ghfTBDlpnzexlh7V4,15230
Mikado/loci/sublocus.py,sha256=shmUJe-dQ2qqoorQ1aWK-_CR5Ejd1QfmvTQC_srmuKk,16229
Mikado/loci/superlocus.py,sha256=EPUv0bPTMr4vx1qiLmNHOnRdAXnBpZbIT6JcHmuOwaA,56103
Mikado/parsers/GFF.py,sha256=J5yAbo3MgdQ9xO_KqBR9PrLwyS6Ce8ekgdb1kk9C8JE,9778
Mikado/parsers/GTF.py,sha256=wyDqZioMkM9-m-Wj06TVzxNhY3x7LiNViWRN-z8l_Tk,12430
Mikado/parsers/__init__.py,sha256=p5ifak2tBGGL-J9xlUC1vh8vcxB2bws8NaWe_7GMLd0,2981
Mikado/parsers/bed12.py,sha256=h1w2KeB2VJsHbQhQY4UE9qC-DpRiQWDKVPftf3l29fc,32479
Mikado/parsers/blast_utils.py,sha256=A9I_XkG57WCzhAb7fW7g7hxh7XACI7oRbvNbenVRLVo,20399
Mikado/parsers/blast_xml.py,sha256=jwn-n0o4h8NJNlj751Ce-ttPuOQ6912gBr-3oy-4mpk,36191
Mikado/parsers/gfannotation.py,sha256=k4p2kzqR9jSe7H_twxd5B06tMbrUOyO-Lma3Ry5mHkc,9235
Mikado/picking/__init__.py,sha256=L8SSzj6DrKaqinhtueNS48imjL8QCrwT1CHZWdDH4ME,57
Mikado/picking/loci_processer.py,sha256=RrVb1gI8lNPs0-piAjdSD2CzxLwwd4CquQ_UKSGzSeE,38438
Mikado/picking/picker.py,sha256=d_QeVxRxFfVi9HCLmuS3i9krpLuG48wa1t140tyK6rY,51242
Mikado/preparation/__init__.py,sha256=yHCBZ5Nrh9hQwETgz8HtVnXw7fW7aARiqoJzDtbJGyU,30
Mikado/preparation/annotation_parser.py,sha256=edD6ixkzsakozKK4gQMw6DZxH0rUCDetijnERR4qqBo,23082
Mikado/preparation/checking.py,sha256=kg8dJ3Wz4iiu8bMBNLYpsFCINTNEpuzpaVVHyISnriw,6906
Mikado/preparation/prepare.py,sha256=cgwes0TkTIDa0dtoSj-PzKiVdmy_bnSqVh0VwP6c4d8,19188
Mikado/scales/__init__.py,sha256=uvoBffTKRBQL3I7BNyptcsw7qyf-DzYNuVc0XtUHiOE,1439
Mikado/scales/accountant.py,sha256=l3cES3FOCivYwh-U3qj2y_dpNEIMTJL5T01cmEYqnfQ,40948
Mikado/scales/assigner.py,sha256=eWk3E7dQrFAoOcvympks_809xpL4zRcXbMdTo4-3d5w,37405
Mikado/scales/class_codes.py,sha256=zxVSmFQ4pji7es4OYriNgyHN846vl4i7H5K8zdm_Plg,21926
Mikado/scales/compare.py,sha256=GZNKxq62uKiBXWXERYlCGG-UptgNkB9Wjfm7IiI71ig,23610
Mikado/scales/contrast.c,sha256=Rf2zUFKh4K3Y9giGnGz4tgdZyZvt42pyftQvV3Q0qR8,393331
Mikado/scales/contrast.cpython-36m-darwin.so,sha256=Xf_kij8uHgmgLnbOLcpBST7zqP6DVvQCuIbaT72bXCo,107728
Mikado/scales/contrast.pxd,sha256=Uj3TvJCvbV1u_MLqaxvKDqE4dqXOMq-TIajoTpfHbXA,275
Mikado/scales/contrast.pyx,sha256=iG114U0uAdRoXfguXOLNMZFXnpEw8Z0EFikgvWl-wBs,18450
Mikado/scales/f1.c,sha256=z8JVA7dnxVWRNvDVj2eOq8d8wXqgwiIa1D7LufY1e5I,137692
Mikado/scales/f1.cpython-36m-darwin.so,sha256=s1UvMHtz-kUpfoaZUgXsD2JjTELq4KbH_1d0VD67M0c,29356
Mikado/scales/f1.pxd,sha256=yF2njd5Hx31T8pbeI4I8PcN5goUBi8--nHHvim-Tp20,53
Mikado/scales/f1.pyx,sha256=Xxzjo-zGeHmG8_XwnVvJw_xWrms51ECw3i8c7a8ExwQ,696
Mikado/scales/resultstorer.py,sha256=CaDaS9X__-UeRhJSy-XjbeOrh1L87IpZIecZWIFTQ64,3883
Mikado/serializers/__init__.py,sha256=L7vYtzoht7emZdEeuEeNHHig-EbkT48pLpmncP5bCIQ,213
Mikado/serializers/external.py,sha256=zLenpxRgkNtVkVdd9kVgliT443pQ8bmpSWA0ayBhs_o,8274
Mikado/serializers/junction.py,sha256=SSRNRr1xaAHh-1anYPZeKRbbvryGVGs8IhBwozhRGOA,8531
Mikado/serializers/orf.py,sha256=3tBWF-vGUUKCWTBmoPKojwoI6E0Ji-Z3ZB8Ny8OZk9w,11378
Mikado/serializers/blast_serializer/__init__.py,sha256=ZN-yLDt2ooyaBxlIHuXnirwmJqJeAdI73KO-V4C7IjM,343
Mikado/serializers/blast_serializer/hit.py,sha256=GfttHCuox4iDludWSEq5StstrBEmyYubznUCNLVh7Hg,10424
Mikado/serializers/blast_serializer/hsp.py,sha256=O9Sy7rf_v6iPxSLUER7GctCEclzBa54YcjQBVgiG1wY,7894
Mikado/serializers/blast_serializer/query.py,sha256=oBRn9bCc4vOnP8FJl34VgmhWDISRa6wP7oPpMoxOi7k,1496
Mikado/serializers/blast_serializer/target.py,sha256=xhoh-it4IjLTgl2BmosTDTLOEEa1f34lozXbgUmCKic,1693
Mikado/serializers/blast_serializer/utils.py,sha256=10vY3fAdbfvqRuTOMxXlsPnda30smQwzjqUV3dJteSw,7356
Mikado/serializers/blast_serializer/xml_serialiser.py,sha256=3jfLN_UdVFrzHHa8npj0ZxjnLo63U_6xSqc7d7j4drM,32405
Mikado/subprograms/__init__.py,sha256=qqfMFDNZX_b8c6Kds71tsRG5kv_iKjI9Czk7Q2Ue-AQ,391
Mikado/subprograms/__main__.py,sha256=sMRP0EZlpkvlQIJSMalOhBPdgnEo0DDIAv9tluk5XXU,137
Mikado/subprograms/compare.py,sha256=s3-uuZ-dlCZ7mlbZB5TaaxTTtS3UGqk19Q2iHni0xmU,5095
Mikado/subprograms/configure.py,sha256=Zpji9_4Qrwu5CxuEnMGUHYCtGUVz2EIrXkBFrVqNhhs,17518
Mikado/subprograms/pick.py,sha256=b0H5Jx-E6vEYMaDfHNm9kyeMUvbCCmBB4bG3MwI12pM,12179
Mikado/subprograms/prepare.py,sha256=ZUj-XxNj8BVaLzsmg0tZVqCM6Bh8U_0B1GhuZuszgT8,10814
Mikado/subprograms/serialise.py,sha256=NbTjuY7enqjOXrhuffazJnhsxi2P_uZAVB2bcONYs5A,17351
Mikado/subprograms/util/__init__.py,sha256=aipPauIERe86BAR5mQdML_Fyuqc24niPo2gsZtCJRc8,3801
Mikado/subprograms/util/awk_gtf.py,sha256=3XrNwTrVCY_GwA0AUfg_eehD8xuD92Wgs7LKexokq6g,3087
Mikado/subprograms/util/class_codes.py,sha256=_aWFWOvF7MS-T75-Z795XVurkU8Xc37p0Nu_EsZ9Y4U,4059
Mikado/subprograms/util/convert.py,sha256=UFkWiYS65l3fIJugWp0qjTEPaCyiJF0-2rpA0WesHwE,2739
Mikado/subprograms/util/grep.py,sha256=I9Y7of4oS13ReAbAC8czGXdebLn-CCrFGd9yfbZ5I1s,6311
Mikado/subprograms/util/merge_blast.py,sha256=Rf646_8Nmu8YbiAAk4ftB8o2zHNjqbjpTuSpa9SV1JQ,1227
Mikado/subprograms/util/metrics.py,sha256=KMooS_2XOIa43GVEIY3yGvdxY2BOK6QBh52xW0Yfmeo,4996
Mikado/subprograms/util/stats.py,sha256=aDDNVA_0pakNY-I3WSxGnqrxcMkeiCaFxmotGNknafU,31530
Mikado/subprograms/util/trim.py,sha256=9VB5F4GYXsvxd5ceM2wiHjQqqcnEcZSxwvqK1hZE-_c,11979
Mikado/tests/__init__.py,sha256=yHCBZ5Nrh9hQwETgz8HtVnXw7fW7aARiqoJzDtbJGyU,30
Mikado/tests/assigner_tester.py,sha256=MGxbwowoOTa-x3wUK23LwAia2KuJ-OizayjY6Zhlgdw,46195
Mikado/tests/chr5.fas.gz,sha256=LlLHmEPX3-6B-zgm2sdMjp8hThusFYEPz0z56WvNZyw,8115933
Mikado/tests/configuration.yaml,sha256=vTjpJp6mSE0JWlTe3rjXbpI9g7KpJzGpp0dBL5AGHBk,5824
Mikado/tests/cufflinks.gtf,sha256=dYJ9RDLZGUzzSZXhElJYUD2NUwFxDfpCh0rtz69Sn6c,17550
Mikado/tests/genome.fai,sha256=pcMDo4JEIas95KK065LCxUUWWiDsnuROJNO_4PSyJC0,210
Mikado/tests/intervaltree_tests.py,sha256=5pe7Fkc6ndYMR3iY3QpVjqdmpvsU0nnsps3SOoDKTXA,7611
Mikado/tests/junctions.bed,sha256=o6ZCYZGZE5g96a5KzN21txF5Fp-YEYl5wXBfYr8eXh0,33332
Mikado/tests/locus_tester.py,sha256=_JnOb95j2F-qn_2XEEkIv3OQ-9vh84YUwhUh0zbIfd0,77380
Mikado/tests/mikado.blast.asn.gz,sha256=6nNAwa3lvO4hcBPn9WkE1CyioDmFLFXweKmfNlQFowQ,207042
Mikado/tests/mikado.blast.xml,sha256=lUFsaMBNDqnWZ6bFlR2WE3-3fH7oaWVQKfFqbKAgM5s,1183411
Mikado/tests/mikado.db,sha256=fuYcjVLWpPJQgD4XL0v346oYjmCHIKjYc--0hNc3YWo,1642496
Mikado/tests/mikado_prepared.gtf,sha256=7dwz1bj6xGH-N7any83bO1jzUjb171Eszy7b_vy4YxY,82820
Mikado/tests/orf_tester.py,sha256=Lm6FiNP-01Au5Zmvxsbfinut5ct71AcXGDb7oXLng3c,25307
Mikado/tests/parser_testing.py,sha256=25oCMB6s6plapbihrEtM8tgoq6z2KpJItFOJNztYnyA,2464
Mikado/tests/plants.suspicious_requirement.yaml,sha256=VjTJG96ZpJnxL8ABZi6UACqhaT9q-Nh9ER9xLKA9ykA,1410
Mikado/tests/scoring_only_cds.yaml,sha256=lfb71e9Qzh3iWvr95p-DUeITzEqX5xa2Q15qZm0uFuc,2758
Mikado/tests/test_bed12.py,sha256=WDV9BREIrWLA0hJNQtlLF5yittGzSZWc8nU_MRHb5as,12868
Mikado/tests/test_blast_related.py,sha256=aSbzlkypML2Yg6Wbleg1hl-SSQ791YOAZGjRkMzABs4,3790
Mikado/tests/test_clique_methods.py,sha256=s6EoqYonYAE_xQXrfrXjLwRUP0-pZu716Nin3Dso4xg,2403
Mikado/tests/test_db_utils.py,sha256=cwdOv_PrHw08hlRnTbwFoaQ9-GQ2-iB2OL7zxvQv688,5692
Mikado/tests/test_external_scores.py,sha256=GN_YJCKX4k5VZ7Z29HiPoCtr5dp_8NEZ-eAcvnQvE2o,1170
Mikado/tests/test_gene.py,sha256=3lLgrTrRsCTRWUTcJ53RK_wwvx4nkwz6vxuftwNwP54,981
Mikado/tests/test_invalid_orfs.py,sha256=2twRzyCs7T_9ZiPyUa01vOj2QYXwMeibh56qODxpqCQ,4723
Mikado/tests/test_json.py,sha256=cfulSp-Ma3pzTIvYrwnV0WKfpfgECPtVPYBq-HNqncM,6336
Mikado/tests/test_metrics.py,sha256=Zs_r_-vhOkHE6OKEETBNDag_App-YeZKjHByH4aIpzg,8857
Mikado/tests/test_modifications.py,sha256=KcZPzlzK5Pn-_EgrgMNF4jofjHY8YTzdCICEnrueGok,3816
Mikado/tests/test_serialisation.py,sha256=BCZ4LoonicF3tYZs-Sy1U8M3Wr5sfTaSgdk25ppMHJE,7609
Mikado/tests/test_splitting.py,sha256=asItlY0F_-TCm6M4CAwczZNbikL1dgeu-Qe8_bHLSI8,17520
Mikado/tests/test_system_calls.py,sha256=TboqmqHBhMqrXBefc-G_5TM0EEAywepkqPr41WJnUXg,39891
Mikado/tests/test_transcript_checker.py,sha256=Xs6xWrb4M8diSxluhAEn3zlh18VNa0mu0nLtto52pnA,16847
Mikado/tests/test_transcript_methods.py,sha256=1BmjgpxxKITFyqOC00-uTpK_pSjzy_irAsvwcYckowk,14791
Mikado/tests/transcript_tester_negative.py,sha256=6aqfUs_svpGhSj0-sYPbulWU9K7nGNG1PAu3f0TgCAw,26481
Mikado/tests/transcript_tester_positive.py,sha256=HDoj3PVZpq5A0M4jQ1vRv2XFSJoVjSwH8EHIDoI7eOA,51496
Mikado/tests/transcript_tester_single.py,sha256=yd1hv4FSH6SjA18kBnXZhgOJDaK3OcV2m2vXiHSGPyM,33342
Mikado/tests/trinity.bed12,sha256=hRKDjULt1bYy4EDCSb4-DhCubOZzqhs3kFUHu8pzHHY,4417
Mikado/tests/trinity.cDNA_match.gff3,sha256=hGsMPYoDEq-dvZ8pocM8p1clmWk7RRfZPtIfEWif9Hw,16938
Mikado/tests/trinity.gff3,sha256=P0u7XYn4u_xOd6zK-MkdeK0tofO3ZpHwk8I5UDSVGIs,21349
Mikado/tests/trinity.gtf,sha256=FiJCdpN5JJ3M3Hs2Gj8BTZ7KQ0w4A-RBDJzab8nAU88,21420
Mikado/tests/trinity.match_matchpart.gff3,sha256=IjLliD1S6GD7iT078e7pFllljHAjKT-CnkbFNF0SCvs,18671
Mikado/tests/trinity_stats.txt,sha256=4emT2V5GdadkAVevWYUs5J03OU84XA5cfzC9T4XT8DQ,2058
Mikado/tests/uniprot_sprot_plants.fasta.gz,sha256=EIv4JqNhQwQ-VnMRBWK43U6Pm1wueU6xHEzrzbjx6bs,6632381
Mikado/tests/utilities_tester.py,sha256=kvn87hObrr7ufzftdSxXxTaDUDKg1Zp7JVL3LS6oPSI,6839
Mikado/tests/__pycache__/__init__.cpython-36.pyc,sha256=feb_MxHxQ1Mo6Cntc-SFzSk8NLm27aoHVXdmCAuDrwU,169
Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc,sha256=r1deBI7rh4tCFI-eKbPH9nDNc3Rpi-0Ut6BcL6hQHw8,32552
Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc,sha256=NWWhl0DcPPTU6ggQkaVahWozx5639gNOME-J_EUBOSM,7990
Mikado/tests/__pycache__/locus_tester.cpython-36.pyc,sha256=zlw6HFqgntIF4r8Cfvw04VBnfL8tNE9f5cZHT9k5Aek,58107
Mikado/tests/__pycache__/orf_tester.cpython-36.pyc,sha256=qLGrnhMhlZtJtNSdvgYtRUtzoaSIoWImCHC0_CBHZI0,24136
Mikado/tests/__pycache__/parser_testing.cpython-36.pyc,sha256=Cket6EHcFc6uXa7aIfU_ZkWHxC4YaLZbNdQVMGtpvYo,2288
Mikado/tests/__pycache__/test_bed12.cpython-36.pyc,sha256=tO59Jh6Z_WCgBFljepNZE2MYx8_1Vu7wd40cIqGCGuI,10664
Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc,sha256=kzBG1fuzm_-wn1N9Ntomd4bxuGqDlWAAkWExzIS2ibE,3492
Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc,sha256=TLdj85bZYItmYBLT-QCJBcp8uzDOkij3UyxD85cksIY,2460
Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc,sha256=aIWn_89OwGyIcKbi4wPsCVLPSfIyDk3C9l-PgekoINw,4887
Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc,sha256=WRkkgb44HPPD4ea2rDetdiI0hUO6ksfzlOXDJbPfdO0,1218
Mikado/tests/__pycache__/test_gene.cpython-36.pyc,sha256=zBzgPGkGEi7jG61s9da4SjNC-rBrJaxxt6XUGQz6dFs,1196
Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc,sha256=JwGuG2YPNMu_xe0l-szq6OtMordL8pwYDn39pAoCBI4,5739
Mikado/tests/__pycache__/test_json.cpython-36.pyc,sha256=bl63NtoiflUZ4X_1gfTxb53aSyngSc5fgXhBHz08dac,3724
Mikado/tests/__pycache__/test_metrics.cpython-36.pyc,sha256=YBUYKz5rS3uKgNqghPcPCirr4gF-j9PFY7fJ0GPHuLA,4601
Mikado/tests/__pycache__/test_modifications.cpython-36.pyc,sha256=o4Jaam8-sHElDyIj4YcHI-EL4-O_-ExmvP4_7dsGmp8,2940
Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc,sha256=KLJ9k2eRuwwhjng5w9OGhRzFkbOGBDLPRRGM1UXmsjg,5810
Mikado/tests/__pycache__/test_splitting.cpython-36.pyc,sha256=aX6nVZN-cTCMAU7-6oKN01ameXXEJEo6RrjecXLiSDU,11913
Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc,sha256=MeodYIFeTifrZ5UgCARTipunUk-y57LZo6IaXKFK26k,30631
Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc,sha256=VjGrnKQ25yFwDQfcSfNbJEWPpNX4ShNVlvKBvALbdWc,15508
Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc,sha256=kQD9X5mFgy1JoCSXsd4biprxpi1aPXbmS42wL-wEt_Y,12878
Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc,sha256=6n7HgzP8S5Zmok3kjt5hKK7f8LzWiqlRKGReJt8fwEo,22157
Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc,sha256=3NiXgvkIPmrHWY7MAMi6X0Nccyr8amz_BSgFDafFaKk,47179
Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc,sha256=j692tQsSlNe8HGSVeYvwkOAy9QZqEyFBv4hFfdQXJl8,22736
Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc,sha256=mNJnZ9Q8Per8HzYD78OsW6gskO0huyoIEDCl7GAgAFE,7065
Mikado/tests/fusion_test/fusion_test.log,sha256=NKMlLpKcTbtB5mG2XLtlK6fiFsNDqISm4NeEAhvHW00,718
Mikado/tests/fusion_test/fusion_test_pred.gtf,sha256=vCa-DiIwmjCMXfSGRMGrSTV883Lgp7NvrW41Q4P48uU,5470
Mikado/tests/fusion_test/fusion_test_ref.gff3,sha256=ozEDqbFG4g0B4ariQ_uip1YUykGTxokkH0_xcDi21fU,5475
Mikado/transcripts/__init__.py,sha256=4nqM22qaY2dl9fYKzjHsJjEiZexE3fPcQF-uSB4Rofo,162
Mikado/transcripts/clique_methods.py,sha256=3L5nBcBPdmFIQlEZB82JtylFFOY0cVveXf-rJxHuhVs,7134
Mikado/transcripts/transcript.py,sha256=8FSaiv64uJghh7rffKPwRmMnDcwgPKYelENg03U5HqY,107177
Mikado/transcripts/transcriptchecker.py,sha256=tsQVjm6W8g1tRoqp-r3x0n3YqKEGURyV51AB2WjlSjk,13529
Mikado/transcripts/transcript_methods/__init__.py,sha256=pgvwS1b2MCFiFEpqIucEsD3zAiYiH-IGotnv3OOC-zs,196
Mikado/transcripts/transcript_methods/finalizing.py,sha256=WKEKx4k7_Nw-0bfCGugTfQ-Rs0dS7cADKPXCy1gONTM,28112
Mikado/transcripts/transcript_methods/printing.py,sha256=XnJicqT9312_YHiUP1SU7u3dsxA-UPPmlydUQ9GqiXc,14771
Mikado/transcripts/transcript_methods/retrieval.py,sha256=MnAYAyK8cfOTNpUwPkcEGRm7UyNxVh9KJ47yG4-pffQ,28813
Mikado/transcripts/transcript_methods/splitting.py,sha256=aFtn-kbrgpZTFyMdLhHKG4L023nLtxq-Yj0fOprLygw,34998
Mikado/utilities/__init__.py,sha256=fX8nkwmhHL5YtWTum2OLQs1Tqd8Dw2h1mHNgtCE1IUA,6178
Mikado/utilities/dbutils.py,sha256=K3h81sETwrhxE_N39VSmMJsHndlHQnOiFJguuNYbd7I,4751
Mikado/utilities/intervaltree.c,sha256=YPHmoMj6bCdIHLcWZ0TUfTiUpqk5NQx28GQ0qqYURFo,651900
Mikado/utilities/intervaltree.cpython-36m-darwin.so,sha256=mweVyxU_wsrkUGox7mmgen6A-itWBzq07AqjgggcxkI,168248
Mikado/utilities/intervaltree.pyx,sha256=zHtko4jjTSnPBGT3zlPew-lrK8y1s-MEOmYNg3GJhKA,19981
Mikado/utilities/log_utils.py,sha256=2ll6GLFKU4b8HaIDzHKw0-T_-o1mL2f3n_MXf5Qgv68,3550
Mikado/utilities/overlap.c,sha256=dOKqxpJ-WFTHpqT0OZsfBzwozBBPgV1b9lA1FojvxRY,144765
Mikado/utilities/overlap.cpython-36m-darwin.so,sha256=9w1cJqQuxdN4Us_RuA-Ml5HnUT0v40pbHkNJNvKN-OE,30164
Mikado/utilities/overlap.pxd,sha256=FCiWDIjY9O0uO_opJNSj9iv_Ndcujov9tu9qY1E2-TI,157
Mikado/utilities/overlap.pyx,sha256=2jJ7tUiqSxv0WRiq-AUGNYNW1Ti3Y8pooTAh42KAftg,1644
Mikado-1.2.4.data/scripts/add_transcript_feature_to_gtf.py,sha256=ccrjfLEkm9Jys9X-zeDwsS2aXRE7ikNM95gRqV0hZCI,1422
Mikado-1.2.4.data/scripts/align_collect.py,sha256=oGcufOVqjrj38NNw-73V_RIUt8r1nIOuQ_42cjAcC8k,2690
Mikado-1.2.4.data/scripts/analyse_metrics.py,sha256=MY3uBOS9m61vrFwkJeVIjxouhuiS8xctHa54obQSHoA,2776
Mikado-1.2.4.data/scripts/asm_collect.py,sha256=ZwVKWQ6YiqxsgkKtgmMbyGvBM0HdpX3Vw6HHzm5L_eo,2778
Mikado-1.2.4.data/scripts/bam2gtf.py,sha256=Uq3FHySoaFwp7J-8wcXVd9kINVlzteNylI-p_9E7g64,4475
Mikado-1.2.4.data/scripts/calculate_distances.py,sha256=NlanHdi7--s2UwpZcYbKhol2XUVwGphRvOa43FLtObs,6185
Mikado-1.2.4.data/scripts/class_run.py,sha256=TnlhXQP4r3mVIpiYltJDlOjo7q0o8d2hM_bk6R2BljA,4386
Mikado-1.2.4.data/scripts/convert_cdna_match_gff3.py,sha256=erbnQrR8MKwvoz5cWSsyH5mWYuS8fySCFb39aF6-1iU,2745
Mikado-1.2.4.data/scripts/create_model.py,sha256=A4zx5CkH9EH5G6hSlqIcnayIwdguQqv_CatsjrhzW7s,8859
Mikado-1.2.4.data/scripts/extract_promoter_regions.py,sha256=0w61bo8VaafxwyrACjHgTKjbvFqKf9eUxdm_irsjVYI,8731
Mikado-1.2.4.data/scripts/getFastaFromIds.py,sha256=7PxGi5wQGRwosayLaTnGsyY7MFnCiQuyqZFsoFTS6iQ,1811
Mikado-1.2.4.data/scripts/gffjunc_to_bed12.py,sha256=kxCf0QcAyKSdIzr7UD0BO2-iAXlgd686-d9TQLFSNc0,2516
Mikado-1.2.4.data/scripts/grep.py,sha256=dOILhU257sk-vOzfiHQRaBcZOfHUaaDz7MWV0AZ_vxY,2888
Mikado-1.2.4.data/scripts/merge_junction_bed12.py,sha256=Ori3th7sa2ywKNfyMCitnSAR9NnD4l0Dx-BRrCOs84c,4918
Mikado-1.2.4.data/scripts/remove_from_embl.py,sha256=ramoOFYx1ool_leg74AR95IAoiicS-PN9gxO0Zdkkko,1383
Mikado-1.2.4.data/scripts/remove_utrs.py,sha256=X5YHZ-JeGXaxjlWR3fVRf97rvtpav7LPfl-DupVtl7Q,1901
Mikado-1.2.4.data/scripts/sanitize_blast_db.py,sha256=6PKyW1Z6S7uA-3rMfz9Z6HGshmPaXYMrRQVfLEgbHMg,1370
Mikado-1.2.4.data/scripts/self_training.py,sha256=y7h842Z7dPFKlhF8sfiXADQRB1-vtv25UkrQoKzObcg,10472
Mikado-1.2.4.data/scripts/split_fasta.py,sha256=qrGHbyYP3cHd6WcLEHtW-ayUgl1nYSQGNOvLIaOW28c,2414
Mikado-1.2.4.data/scripts/tease_maker_apart.py,sha256=Biqpjo7V0LFEcVt44xaX3eQY6TaW_JKBlsRhtIEeOWk,1992
Mikado-1.2.4.data/scripts/trim_long_introns.py,sha256=aYk6jgFqqSKXGH_2gXEWB3at5kf5cUixym698R_qEVU,6748
Mikado-1.2.4.dist-info/METADATA,sha256=1t9m-Quu0GbX4pdH4n2nf7e6emo1JnWeaVTNQaFGxnw,3389
Mikado-1.2.4.dist-info/RECORD,,
Mikado-1.2.4.dist-info/WHEEL,sha256=UqcqXAoc4RHC8q5_TgL5P3tJpP_skRlw_0RsSzKyXFc,110
Mikado-1.2.4.dist-info/entry_points.txt,sha256=vnZqdYKL5Rkyo4unKz3Hp2XPALnhK9E4UdzdJT06I0E,68
Mikado-1.2.4.dist-info/top_level.txt,sha256=_NR6oMw8aQOrHKIlqNHQGWXkiq1y7KmJkC3rIK7BcDI,7
