.dockerignore
.gitignore
.gitlab-ci.yml
.readthedocs.yaml
DEVELOPER.md
LICENSE
README.md
pyproject.toml
requirements.txt
Docker/Dockerfile
Docker/Dockerfile.cuda
Docker/build.sh
Docker/dependencies-v2.1
Docker/fetch_commit_hashes.sh
Docker/get_scm_version.sh
bin/concat_linc_files
bin/plotrapthor
bin/rapthor
ci/debug.sh
ci/run.sh
ci/ubuntu_22_04-base
ci/ubuntu_22_04-rapthor
debug/everybeam/Dockerfile
debug/everybeam/build.sh
debug/everybeam/fails.py
debug/everybeam/run.sh
debug/scan_ms/Dockerfile
debug/scan_ms/build.sh
debug/scan_ms/entry.sh
debug/scan_ms/fails.py
debug/scan_ms/run.sh
debug/scan_ms/succeeds.py
docs/Makefile
docs/make.bat
docs/requirements.txt
docs/source/acknowledgements.rst
docs/source/capabilities.rst
docs/source/changelog.rst
docs/source/cluster_module.rst
docs/source/code.rst
docs/source/conf.py
docs/source/context_module.rst
docs/source/field_class.rst
docs/source/future.rst
docs/source/help.rst
docs/source/index.rst
docs/source/installation.rst
docs/source/miscellaneous_module.rst
docs/source/observation_class.rst
docs/source/operation_class.rst
docs/source/operations.rst
docs/source/parset.rst
docs/source/parset_module.rst
docs/source/preparation.rst
docs/source/products.rst
docs/source/rapthor_flow.png
docs/source/running.rst
docs/source/running_skao.rst
docs/source/sector_class.rst
docs/source/steps.rst
docs/source/strategy.rst
docs/source/structure.rst
docs/source/tips.rst
docs/source/tutorials.rst
examples/custom_calibration_strategy.py
examples/custom_imaging_strategy.py
examples/custom_ska_low.py
examples/default_calibration_strategy.py
examples/default_imaging_strategy.py
examples/parset2json.py
examples/rapthor.parset
examples/rapthor_skao_multinode.parset
examples/rapthor_skao_multinode.slurm
examples/rapthor_skao_singlenode.parset
examples/rapthor_skao_singlenode.slurm
examples/setup_skao_aws.sh
rapthor/__init__.py
rapthor/_logging.py
rapthor/_version.py
rapthor/modifystate.py
rapthor/process.py
rapthor.egg-info/PKG-INFO
rapthor.egg-info/SOURCES.txt
rapthor.egg-info/dependency_links.txt
rapthor.egg-info/requires.txt
rapthor.egg-info/top_level.txt
rapthor/lib/__init__.py
rapthor/lib/cluster.py
rapthor/lib/context.py
rapthor/lib/cwl.py
rapthor/lib/cwlrunner.py
rapthor/lib/facet.py
rapthor/lib/field.py
rapthor/lib/fitsimage.py
rapthor/lib/miscellaneous.py
rapthor/lib/observation.py
rapthor/lib/operation.py
rapthor/lib/parset.py
rapthor/lib/sector.py
rapthor/lib/strategy.py
rapthor/lib/toil_batch_systems/__init__.py
rapthor/lib/toil_batch_systems/toil_batch_system_slurm_static.py
rapthor/operations/__init__.py
rapthor/operations/calibrate.py
rapthor/operations/concatenate.py
rapthor/operations/image.py
rapthor/operations/mosaic.py
rapthor/operations/predict.py
rapthor/pipeline/execution/concat_ms.cwl
rapthor/pipeline/execution/fetch_data.cwl
rapthor/pipeline/execution/hba_nl.cwl
rapthor/pipeline/execution/run_rapthor.cwl
rapthor/pipeline/execution/tar_directory.cwl
rapthor/pipeline/execution/utils.js
rapthor/pipeline/execution/examples/hba_nl/L667526.config.json
rapthor/pipeline/execution/examples/hba_nl/hba_nl.json
rapthor/pipeline/execution/examples/hba_nl/hba_nl.sh
rapthor/pipeline/parsets/calibrate_di_pipeline.cwl
rapthor/pipeline/parsets/calibrate_pipeline.cwl
rapthor/pipeline/parsets/concatenate_pipeline.cwl
rapthor/pipeline/parsets/image_pipeline.cwl
rapthor/pipeline/parsets/image_sector_pipeline.cwl
rapthor/pipeline/parsets/mosaic_pipeline.cwl
rapthor/pipeline/parsets/mosaic_type_pipeline.cwl
rapthor/pipeline/parsets/predict_di_pipeline.cwl
rapthor/pipeline/parsets/predict_nc_pipeline.cwl
rapthor/pipeline/parsets/predict_pipeline.cwl
rapthor/pipeline/steps/add_sector_models.cwl
rapthor/pipeline/steps/adjust_h5parm_sources.cwl
rapthor/pipeline/steps/blank_image.cwl
rapthor/pipeline/steps/calculate_image_diagnostics.cwl
rapthor/pipeline/steps/collect_h5parms.cwl
rapthor/pipeline/steps/collect_screen_h5parms.cwl
rapthor/pipeline/steps/combine_h5parms.cwl
rapthor/pipeline/steps/compress_mosaic_image.cwl
rapthor/pipeline/steps/compress_sector_images.cwl
rapthor/pipeline/steps/concat_ms_files.cwl
rapthor/pipeline/steps/ddecal_solve.cwl
rapthor/pipeline/steps/filter_skymodel.cwl
rapthor/pipeline/steps/idgcal_solve_phase.cwl
rapthor/pipeline/steps/idgcal_solve_phase_and_gain.cwl
rapthor/pipeline/steps/make_catalog_from_image_cube.cwl
rapthor/pipeline/steps/make_image_cube.cwl
rapthor/pipeline/steps/make_mosaic.cwl
rapthor/pipeline/steps/make_mosaic_template.cwl
rapthor/pipeline/steps/make_region_file.cwl
rapthor/pipeline/steps/merge_array_directories.cwl
rapthor/pipeline/steps/merge_array_files.cwl
rapthor/pipeline/steps/normalize_flux_scale.cwl
rapthor/pipeline/steps/plot_solutions.cwl
rapthor/pipeline/steps/predict_model_data.cwl
rapthor/pipeline/steps/prepare_imaging_data.cwl
rapthor/pipeline/steps/process_gains.cwl
rapthor/pipeline/steps/regrid_image.cwl
rapthor/pipeline/steps/subtract_sector_models.cwl
rapthor/pipeline/steps/writable_dir.cwl
rapthor/pipeline/steps/wsclean_draw_model.cwl
rapthor/pipeline/steps/wsclean_image_facets.cwl
rapthor/pipeline/steps/wsclean_image_no_dde.cwl
rapthor/pipeline/steps/wsclean_image_screens.cwl
rapthor/pipeline/steps/wsclean_mpi_image_facets.cwl
rapthor/pipeline/steps/wsclean_mpi_image_no_dde.cwl
rapthor/pipeline/steps/wsclean_mpi_image_screens.cwl
rapthor/pipeline/steps/wsclean_restore.cwl
rapthor/scripts/__init__.py
rapthor/scripts/add_sector_models.py
rapthor/scripts/adjust_h5parm_sources.py
rapthor/scripts/blank_image.py
rapthor/scripts/calculate_image_diagnostics.py
rapthor/scripts/collect_screen_h5parms.py
rapthor/scripts/combine_h5parms.py
rapthor/scripts/concat_ms.py
rapthor/scripts/filter_skymodel.py
rapthor/scripts/make_catalog_from_image_cube.py
rapthor/scripts/make_image_cube.py
rapthor/scripts/make_mosaic.py
rapthor/scripts/make_mosaic_template.py
rapthor/scripts/make_region_file.py
rapthor/scripts/mpi_runner.sh
rapthor/scripts/normalize_flux_scale.py
rapthor/scripts/plot_rapthor_timing.py
rapthor/scripts/process_gains.py
rapthor/scripts/regrid_image.py
rapthor/scripts/subtract_sector_models.py
rapthor/settings/defaults.json
rapthor/settings/defaults.parset
rapthor/settings/defaults_skalow.parset
rapthor/skymodels/3C196-pandey.skymodel
rapthor/skymodels/3c147-SH.skymodel
rapthor/skymodels/3c286-SH.skymodel
rapthor/skymodels/3c287-SH.skymodel
rapthor/skymodels/3c295-twocomp.skymodel.deprecated
rapthor/skymodels/3c380-SH.skymodel
rapthor/skymodels/3c48-SH.skymodel
sbin/compare_workflow_results.py
tests/conftest.py
tests/test_modifystate.py
tests/test_process.py
tests/lib/test_cluster.py
tests/lib/test_context.py
tests/lib/test_cwl.py
tests/lib/test_cwlrunner.py
tests/lib/test_facet.py
tests/lib/test_field.py
tests/lib/test_fitsimage.py
tests/lib/test_miscellaneous.py
tests/lib/test_observation.py
tests/lib/test_operation.py
tests/lib/test_parset.py
tests/lib/test_sector.py
tests/lib/test_strategy.py
tests/operations/test_calibrate.py
tests/operations/test_concatenate.py
tests/operations/test_image.py
tests/operations/test_mosaic.py
tests/operations/test_predict.py
tests/resources/calibration_skymodel.txt
tests/resources/rapthor_complete.parset.template
tests/resources/rapthor_complete.parset_dict.template
tests/resources/rapthor_minimal.parset.template
tests/resources/rapthor_minimal.parset_dict.template
tests/resources/test.parset
tests/resources/test.reg
tests/resources/test_apparent_sky.txt
tests/resources/test_true_sky.txt
tests/scripts/conftest.py
tests/scripts/test_add_sector_models.py
tests/scripts/test_adjust_h5parm_sources.py
tests/scripts/test_blank_image.py
tests/scripts/test_calculate_image_diagnostics.py
tests/scripts/test_combine_h5parms.py
tests/scripts/test_concat_ms.py
tests/scripts/test_filter_skymodel.py
tests/scripts/test_make_catalog_from_image_cube.py
tests/scripts/test_make_image_cube.py
tests/scripts/test_make_mosaic.py
tests/scripts/test_make_mosaic_template.py
tests/scripts/test_make_region_file.py
tests/scripts/test_normalize_flux_scale.py
tests/scripts/test_plot_rapthor_timing.py
tests/scripts/test_process_gains.py
tests/scripts/test_regrid_image.py
tests/scripts/test_subtract_sector_models.py