MANIFEST.in
pyproject.toml
docs/MSIverse_User_Guide.md
docs/README.md
docs/SPAMTP_PARITY.md
docs/THIRD_PARTY_NOTICES.md
msiverse/__init__.py
msiverse/_cardinal.py
msiverse/_fgsea.py
msiverse/_metadata.py
msiverse/_model.py
msiverse/_ssc.py
msiverse/_ssc_kmeans.py
msiverse/analysis.py
msiverse/differential.py
msiverse/io.py
msiverse/metaspace.py
msiverse/multiomics.py
msiverse/network.py
msiverse/pathway.py
msiverse/plotting.py
msiverse/spatial.py
msiverse.egg-info/PKG-INFO
msiverse.egg-info/SOURCES.txt
msiverse.egg-info/dependency_links.txt
msiverse.egg-info/requires.txt
msiverse.egg-info/top_level.txt
msiverse/annotate/__init__.py
msiverse/annotate/_api.py
msiverse/annotate/_engine.py
msiverse/annotate/_identifiers.py
msiverse/annotate/_ms1_id.py
msiverse/annotate/_resources.py
msiverse/annotate/LICENSES/GPL-2.txt
msiverse/annotate/LICENSES/SpaMTP-MIT.txt
msiverse/annotate/LICENSES/THIRD_PARTY_NOTICES.md
msiverse/annotate/LICENSES/fgsea-MIT.txt
msiverse/preprocess/__init__.py
msiverse/resources/Chebi_db.parquet
msiverse/resources/GNPS_db.parquet
msiverse/resources/HMDB_db.parquet
msiverse/resources/Lipidmaps_db.parquet
msiverse/resources/RAMP_Reactome_catalog.parquet
msiverse/resources/RAMP_Reactome_edges.parquet
msiverse/resources/RAMP_hmdb_catalog.parquet
msiverse/resources/RAMP_hmdb_edges.parquet
msiverse/resources/RAMP_kegg_catalog.parquet
msiverse/resources/RAMP_kegg_edges.parquet
msiverse/resources/RAMP_wikipathway_catalog.parquet
msiverse/resources/RAMP_wikipathway_edges.parquet
msiverse/resources/adduct_file.parquet
msiverse/resources/analyte.parquet
msiverse/resources/analytehaspathway.parquet
msiverse/resources/chem_props.parquet
msiverse/resources/filtered_fmp10.parquet
msiverse/resources/manifest.json
msiverse/resources/pathway.parquet
msiverse/resources/ramp_db_metadata.json
msiverse/resources/reaction_type.parquet
msiverse/resources/source_df.parquet
tests/test_annotation_evidence.py
tests/test_cardinal_io.py
tests/test_cardinal_ssc.py
tests/test_metaspace_png.py
tests/test_remaining_modules.py
tests/test_spamtp_analysis_golden.py
tests/test_spamtp_direct_golden.py
tests/test_spamtp_golden.py
tests/test_spamtp_port.py
tests/test_spamtp_unblocked_golden.py
tests/test_uns_schema.py
tests/test_visualization_metaspace.py