MANIFEST.in
README.md
setup.py
bioflowgraph/__init__.py
bioflowgraph/const.py
bioflowgraph/env.py
bioflowgraph/polling.py
bioflowgraph/sample_list_reader.py
bioflowgraph/task.py
bioflowgraph/task_graph.py
bioflowgraph/unit.py
bioflowgraph.egg-info/PKG-INFO
bioflowgraph.egg-info/SOURCES.txt
bioflowgraph.egg-info/dependency_links.txt
bioflowgraph.egg-info/requires.txt
bioflowgraph.egg-info/top_level.txt
bioflowgraph/tumor_snv_calling/__init__.py
bioflowgraph/tumor_snv_calling/task_graph.py
bioflowgraph/units/CalculateContamination.json
bioflowgraph/units/FilterMutectCalls.json
bioflowgraph/units/GetPileupSummaries.json
bioflowgraph/units/LearnReadOrientationModel.json
bioflowgraph/units/annovar.json
bioflowgraph/units/bwamem2.json
bioflowgraph/units/markdup.json
bioflowgraph/units/mutect2.json
bioflowgraph/units/sortbam.json
bioflowgraph/units/sys/cat.json
bioflowgraph/units/sys/cp.json