LICENSE.txt
MANIFEST.in
readme.md
setup.cfg
setup.py
baseqSNV/__init__.py
baseqSNV/annovar.py
baseqSNV/cmd.py
baseqSNV/config.py
baseqSNV/pipe.py
baseqSNV/process.py
baseqSNV/quality.py
baseqSNV.egg-info/PKG-INFO
baseqSNV.egg-info/SOURCES.txt
baseqSNV.egg-info/dependency_links.txt
baseqSNV.egg-info/entry_points.txt
baseqSNV.egg-info/requires.txt
baseqSNV.egg-info/top_level.txt
baseqSNV/gatk/__init__.py
baseqSNV/gatk/align.py
baseqSNV/gatk/bqsr.py
baseqSNV/gatk/callvar.py
baseqSNV/gatk/createpon.py
baseqSNV/gatk/markdup.py
baseqSNV/gatk/mutect.py
baseqSNV/gatk/pipe.py
baseqSNV/gatk/selectvar.py
baseqSNV/qc/__init__.py
baseqSNV/qc/cmd.py
baseqSNV/qc/enrich.py
baseqSNV/qc/saturate.py
baseqSNV/vcf/GATK.py
baseqSNV/vcf/__init__.py
baseqSNV/vcf/annovar.py
baseqSNV/vcf/cmd.py