LICENSE
README.md
pyproject.toml
app/backend/_bootstrap.py
app/backend/main.py
app/backend/state.py
app/backend/exports/verification_script.py
app/backend/routers/__init__.py
app/backend/routers/execution.py
app/backend/routers/ingestion.py
app/backend/routers/planning.py
app/backend/routers/reporting.py
core/__init__.py
core/database.py
core/models.py
core/cli/__init__.py
core/cli/main.py
core/ingestion/__init__.py
core/ingestion/csv_loader.py
core/ingestion/variable_classifier.py
core/masking/__init__.py
core/masking/gate.py
core/planning/__init__.py
core/planning/diagnostics.py
core/planning/lock.py
core/planning/study_plan.py
core/planning/test_selector.py
core/provenance/__init__.py
core/provenance/hashing.py
core/provenance/tracker.py
core/reporting/__init__.py
core/reporting/appendix.py
core/reporting/bundle.py
core/reporting/excel_export.py
core/reporting/forensics.py
core/reporting/forest_plot.py
core/reporting/lineage.py
core/reporting/manuscript_draft.py
core/reporting/plots.py
core/reporting/strobe_checklist.py
core/reporting/flowchart/__init__.py
core/reporting/flowchart/flowchart.py
core/stats/__init__.py
core/stats/descriptive.py
core/stats/inferential.py
core/stats/multiple_comparisons.py
core/stats/post_hoc.py
exports/verification_script.py
research_tool_cli.egg-info/PKG-INFO
research_tool_cli.egg-info/SOURCES.txt
research_tool_cli.egg-info/dependency_links.txt
research_tool_cli.egg-info/entry_points.txt
research_tool_cli.egg-info/requires.txt
research_tool_cli.egg-info/top_level.txt
tests/__init__.py
tests/conftest.py
tests/test_amendments.py
tests/test_analyze_batch_robustness.py
tests/test_app_statistical_reporting.py
tests/test_benchmark_21.py
tests/test_bundle.py
tests/test_cox_ph_plan.py
tests/test_csv_loader.py
tests/test_end_to_end.py
tests/test_excel_export.py
tests/test_flowchart.py
tests/test_forensics.py
tests/test_forest_plot.py
tests/test_from_json.py
tests/test_latest_plan_version.py
tests/test_lineage.py
tests/test_lock_immutability.py
tests/test_m1_fk_violation.py
tests/test_m2_data_hash_consistency.py
tests/test_m3_correction_timing.py
tests/test_m4_dedup_field.py
tests/test_m5_excel_hash_scope.py
tests/test_m6_fisher_exact_naming.py
tests/test_m7_duplicate_study_plan.py
tests/test_m8_filter_superseded.py
tests/test_m9_table1_groupby.py
tests/test_manuscript_draft.py
tests/test_masking_gate.py
tests/test_masking_migration.py
tests/test_multiple_comparisons.py
tests/test_plan_validation.py
tests/test_plots.py
tests/test_post_hoc_tagging.py
tests/test_posthoc_analyze.py
tests/test_provenance_tracker.py
tests/test_roadmap_features.py
tests/test_stats_descriptive.py
tests/test_stats_inferential.py
tests/test_strobe_checklist.py
tests/test_test_selector.py
tests/test_variable_classifier.py