CITATION.cff
LICENSE
MANIFEST.in
README.md
pyproject.toml
src/rbceq2/__init__.py
src/rbceq2/main.py
src/rbceq2.egg-info/PKG-INFO
src/rbceq2.egg-info/SOURCES.txt
src/rbceq2.egg-info/dependency_links.txt
src/rbceq2.egg-info/entry_points.txt
src/rbceq2.egg-info/requires.txt
src/rbceq2.egg-info/top_level.txt
src/rbceq2/IO/PDF_reports.py
src/rbceq2/IO/__init__.py
src/rbceq2/IO/encoders.py
src/rbceq2/IO/record_data.py
src/rbceq2/IO/validation.py
src/rbceq2/IO/vcf.py
src/rbceq2/core_logic/__init__.py
src/rbceq2/core_logic/alleles.py
src/rbceq2/core_logic/co_existing.py
src/rbceq2/core_logic/constants.py
src/rbceq2/core_logic/data_procesing.py
src/rbceq2/core_logic/filter_semantics.py
src/rbceq2/core_logic/large_variants.py
src/rbceq2/core_logic/utils.py
src/rbceq2/db/__init__.py
src/rbceq2/db/db.py
src/rbceq2/filters/__init__.py
src/rbceq2/filters/geno.py
src/rbceq2/filters/knops.py
src/rbceq2/filters/phased.py
src/rbceq2/filters/shared_filter_functionality.py
src/rbceq2/phenotype/__init__.py
src/rbceq2/phenotype/antigens.py
src/rbceq2/phenotype/choose_pheno.py
src/rbceq2/resources/db.tsv
src/rbceq2/resources/filter_values.tsv
tests/test_IO.py
tests/test_VCF.py
tests/test_allele_coverage.py
tests/test_alleles.py
tests/test_ants.py
tests/test_choose_pheno.py
tests/test_co_filters.py
tests/test_coexisting.py
tests/test_data_processing.py
tests/test_db.py
tests/test_deletion_phase_seed.py
tests/test_deletion_placement.py
tests/test_duplicate_row_agreement.py
tests/test_filter_semantics.py
tests/test_filters_phase.py
tests/test_fut3_secretor.py
tests/test_fy_null_token.py
tests/test_geno_filters.py
tests/test_large_variants.py
tests/test_locus_copies.py
tests/test_main.py
tests/test_multiallelic.py
tests/test_pdf.py
tests/test_phase_evidence.py
tests/test_phase_flip_invariance.py
tests/test_phase_set_provenance.py
tests/test_ploidy.py
tests/test_record_data.py
tests/test_sv_build_selection.py
tests/test_sv_match_ambiguity.py
tests/test_sv_match_ties.py
tests/test_sv_provenance.py
tests/test_utils.py