README.rst
setup.py
brie/__init__.py
brie/brie.py
brie/brie_diff.py
brie/brie_factor.py
brie.egg-info/PKG-INFO
brie.egg-info/SOURCES.txt
brie.egg-info/dependency_links.txt
brie.egg-info/entry_points.txt
brie.egg-info/requires.txt
brie.egg-info/top_level.txt
brie/events/__init__.py
brie/events/defineEvents.py
brie/events/event_filter.py
brie/events/event_maker.py
brie/events/parseTables.py
brie/models/__init__.py
brie/models/model_brie.py
brie/utils/__init__.py
brie/utils/bias_utils.py
brie/utils/fasta_utils.py
brie/utils/gtf_utils.py
brie/utils/run_utils.py
brie/utils/sam_utils.py
brie/utils/tran_utils.py