# Dependencies required for running the "loose" version of alphabase.
# All dependencies that are also included in `requirements.txt` must be added also here (enforced by a test).
# TODO clean the requirements
numba
numpy
pyyaml
pandas
h5py
contextlib2
xxhash
biopython
psutil
tqdm
scikit-learn
regex
# pydivsufsort  # TODO this is used by lcp_digest.py?
dask
dask_expr
pyahocorasick
pyteomics
lxml
rdkit==2024.3.3 # test: tolerate_version
