CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
docker-compose.yml
setup.py
totembionet.py
docs/Makefile
docs/make.bat
docs/source/conf.py
docs/source/index.rst
docs/source/static/model-picker.png
docs/source/static/quit.png
totembionet/Dockerfile
totembionet.egg-info/PKG-INFO
totembionet.egg-info/SOURCES.txt
totembionet.egg-info/dependency_links.txt
totembionet.egg-info/entry_points.txt
totembionet.egg-info/requires.txt
totembionet.egg-info/top_level.txt
totembionet/discrete-model/LICENSE.txt
totembionet/discrete-model/MANIFEST.in
totembionet/discrete-model/README.rst
totembionet/discrete-model/setup.py
totembionet/discrete-model/discrete_model/__init__.py
totembionet/discrete-model/discrete_model/discrete_model.py
totembionet/discrete-model/discrete_model/expression.py
totembionet/discrete-model/discrete_model/gene.py
totembionet/discrete-model/discrete_model/influence_graph.py
totembionet/discrete-model/discrete_model/json_reader.py
totembionet/discrete-model/discrete_model/json_writer.py
totembionet/discrete-model/discrete_model/multiplex.py
totembionet/discrete-model/discrete_model/parser.py
totembionet/discrete-model/discrete_model/resource_table.py
totembionet/discrete-model/discrete_model/state.py
totembionet/discrete-model/discrete_model/transition.py
totembionet/discrete-model/resources/mucusOperonV3.out
totembionet/discrete-model/resources/mucusOperonV4.out
totembionet/discrete-model/tests/test.py
totembionet/ggea/LICENSE.txt
totembionet/ggea/MANIFEST.in
totembionet/ggea/README.rst
totembionet/ggea/setup.py
totembionet/ggea/ggea/__init__.py
totembionet/ggea/ggea/ggea.py
totembionet/ggea/resources/model2346.out
totembionet/ggea/tests/test.py
totembionet/model-picker/LICENSE.txt
totembionet/model-picker/README.rst
totembionet/model-picker/setup.cfg
totembionet/model-picker/setup.py
totembionet/model-picker/model_picker/__init__.py
totembionet/model-picker/model_picker/model_picker.py
totembionet/model-picker/tests/test.py
totembionet/save-experiences/LICENSE.txt
totembionet/save-experiences/README.rst
totembionet/save-experiences/setup.cfg
totembionet/save-experiences/setup.py
totembionet/save-experiences/save_experiences/__init__.py
totembionet/save-experiences/save_experiences/save.py
totembionet/simu-net/LICENSE.txt
totembionet/simu-net/MANIFEST.in
totembionet/simu-net/README.rst
totembionet/simu-net/setup.py
totembionet/simu-net/resources/day_night_cycle.out
totembionet/simu-net/resources/mucusOperonV3.out
totembionet/simu-net/simu_net/__init__.py
totembionet/simu-net/simu_net/simu_net.py
totembionet/simu-net/tests/test.py
totembionet/smb-lib/LICENSE.txt
totembionet/smb-lib/README.rst
totembionet/smb-lib/infoAccount
totembionet/smb-lib/setup.cfg
totembionet/smb-lib/setup.py
totembionet/smb-lib/smb_lib/__init__.py
totembionet/smb-lib/smb_lib/smbLib.py
totembionet/smb-lib/tests/test.py
totembionet/tutorials/model2346.ipynb
totembionet/tutorials/usecase.ipynb
totembionet/tutorials/workflow.ipynb
totembionet/tutorials/ggea/ggea.ipynb
totembionet/tutorials/model-picker/model-picker.ipynb
totembionet/tutorials/requierements/NuSMV-2.6.0-linux64.tar.gz
totembionet/tutorials/requierements/smbionetjava.jar
totembionet/tutorials/resources/BIOSURFACTANTS_EXP.smb
totembionet/tutorials/resources/MODEL_XYC.txt
totembionet/tutorials/resources/input_file.smb
totembionet/tutorials/resources/jlaville.smb
totembionet/tutorials/resources/metabolism.smb
totembionet/tutorials/resources/model2346.out
totembionet/tutorials/resources/mucusOperonV1.out
totembionet/tutorials/resources/mucusOperonV1.smb
totembionet/tutorials/resources/mucusOperonV1.smv
totembionet/tutorials/resources/mucusOperonV2.smb
totembionet/tutorials/resources/mucusOperonV3.smb
totembionet/tutorials/resources/mucusOperonV3CTL.smb
totembionet/tutorials/resources/mucusOperonV3Graph.smb
totembionet/tutorials/resources/mucusOperonV4.out
totembionet/tutorials/simu-net/simu-net.ipynb
totembionet/tutorials/smb-lib/smbionet.ipynb