LICENSE
MANIFEST.in
README.md
setup.py
aptest/__init__.py
aptest/mcl2map.py
aptest.egg-info/PKG-INFO
aptest.egg-info/SOURCES.txt
aptest.egg-info/dependency_links.txt
aptest.egg-info/entry_points.txt
aptest.egg-info/requires.txt
aptest.egg-info/top_level.txt
aptest/cluster/__init__.py
aptest/cluster/adj_ap.py
aptest/cluster/apcluster.py
aptest/cluster/calscore.py
aptest/cluster/ctgconnect.py
aptest/cluster/final.py
aptest/cluster/mergecluster.py
aptest/cluster/runap.py
aptest/cluster/runmcl.py
aptest/exec/__init__.py
aptest/exec/maincluster.py
aptest/newscore/__init__.py
aptest/newscore/ratiosim.py
aptest/scripts/phypertest.R
aptest/utils/__init__.py
aptest/utils/check.py
aptest/utils/prepare_from_contig.py
aptest/utils/protein_mcl.py