LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
src/ribotools/__init__.py
src/ribotools/defaults.py
src/ribotools.egg-info/PKG-INFO
src/ribotools.egg-info/SOURCES.txt
src/ribotools.egg-info/dependency_links.txt
src/ribotools.egg-info/entry_points.txt
src/ribotools.egg-info/requires.txt
src/ribotools.egg-info/top_level.txt
src/ribotools/htseq_wf/__init__.py
src/ribotools/htseq_wf/alignment_workflow.py
src/ribotools/htseq_wf/call_htseq_count.py
src/ribotools/htseq_wf/get_ribo_periodic.py
src/ribotools/htseq_wf/keep_ribo_periodic.py
src/ribotools/htseq_wf/run_htseq_workflow.py
src/ribotools/pgrms/__init__.py
src/ribotools/pgrms/get_all_bam_periodic.py
src/ribotools/pgrms/get_gtf_from_predictions.py
src/ribotools/scripts/__init__.py
src/ribotools/scripts/__main__.py
src/ribotools/scripts/get-sample-table
src/ribotools/scripts/run-dea
src/ribotools/scripts/run-tea
src/ribotools/utils/__init__.py
src/ribotools/utils/cl_utils.py
src/ribotools/utils/filenames.py