Metadata-Version: 1.1
Name: epitopepredict
Version: 0.4.0
Summary: Python package for epitope prediction
Home-page: https://github.com/dmnfarrell/epitopepredict
Author: Damien Farrell
Author-email: farrell.damien@gmail.com
License: GPL v3
Description: Background
        ----------
        
        epitopepredict provides a standardized programmatic interface and command line tool for
        executing multiple epitope prediction methods. Currently this largely consists of interfaces
        to several MHC binding prediction, the results of which can then be processed and visualized
        in a consistent manner. The Tepitope module implements the TEPITOPEPan method is provided as
        a 'built in' method. The IEDB tools and netMHCIIpan and mhcflurry are also supported.
        All of these tools are free for academic use. This software runs on most linux systems.
        Users are recommended to use the snap package for convenience. This software is under
        active development particularly with a view to improve the command line and web tools.
        
        Documentation is at http://epitopepredict.readthedocs.io
        
        Supported methods
        -----------------
        
        TEPITOPEPan
        NetMHCpan
        IEDB MHC tools
        MHCflurry
        
        Dependencies
        ------------
        
        pandas
        biopython
        tornado
        bokeh
        mhcflurry (optional)
        
        Installation
        ------------
        
        pip install epitopepredict
        
        Links
        -----
        
        https://github.com/dmnfarrell/epitopepredict
        
Keywords: epitope,mhc,immunology,biology
Platform: UNKNOWN
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.6
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
