.gitignore
example.py
pyproject.toml
readme.md
test_pdf_and_oneclass.py
test_plots.py
.github/workflows/publish.yml
examples/simulation_bounded_fc.py
examples/simulation_calibration.py
examples/simulation_permutation_bounded_fc.py
examples/simulation_output/1_truth_composition.pdf
examples/simulation_output/2_score_vs_ncells.pdf
examples/simulation_output/3_per_ct_breakdown.pdf
examples/simulation_output_calibration/1_calibration_curves.pdf
examples/simulation_output_calibration/2_score_heatmap.pdf
examples/simulation_output_calibration/3_violins_2x.pdf
examples/simulation_output_calibration/3_violins_5x.pdf
examples/simulation_output_calibration/calibration_reference_table.csv
examples/simulation_output_perm/1_observed_vs_null.pdf
examples/simulation_output_perm/2_pvalue_distribution.pdf
examples/simulation_output_perm/3_power_curve.pdf
lotsofcells/__init__.py
lotsofcells/_parallel.py
lotsofcells/_stats.py
lotsofcells/_utils.py
lotsofcells/entropy.py
lotsofcells/gene_source.py
lotsofcells/lotsofcells.py
lotsofcells/plots.py
lotsofcells.egg-info/PKG-INFO
lotsofcells.egg-info/SOURCES.txt
lotsofcells.egg-info/dependency_links.txt
lotsofcells.egg-info/requires.txt
lotsofcells.egg-info/scm_file_list.json
lotsofcells.egg-info/scm_version.json
lotsofcells.egg-info/top_level.txt
lotsofcells/__pycache__/__init__.cpython-39.pyc
lotsofcells/__pycache__/_stats.cpython-39.pyc
lotsofcells/__pycache__/_utils.cpython-39.pyc
lotsofcells/__pycache__/entropy.cpython-39.pyc
lotsofcells/__pycache__/lotsofcells.cpython-39.pyc
lotsofcells/__pycache__/plots.cpython-39.pyc
tests/Breast_cancer/HumanBreastCancerXenium_adata_processed_DCIS1.h5ad