# Generated by roxygen2: do not edit by hand

S3method(Ops,phenotype_expr)
S3method(as.character,consortium_manuscript)
S3method(as.data.frame,cif_result)
S3method(as.data.frame,consortium_calibration)
S3method(as.data.frame,consortium_cohort_diagnostics)
S3method(as.data.frame,consortium_cross_site_validation)
S3method(as.data.frame,consortium_explainability)
S3method(as.data.frame,consortium_privacy_audit)
S3method(as.data.frame,consortium_risk_factors)
S3method(as.data.frame,consortium_scores)
S3method(as.data.frame,decision_curve_analysis)
S3method(as.data.frame,federated_meta_analysis)
S3method(as.data.frame,fine_gray_result)
S3method(as.data.frame,omop_survival_result)
S3method(close,federated_consortium)
S3method(plot,cif_result)
S3method(plot,consortium_calibration)
S3method(plot,consortium_cohort_diagnostics)
S3method(plot,consortium_cross_site_validation)
S3method(plot,consortium_explainability)
S3method(plot,consortium_risk_factors)
S3method(plot,decision_curve_analysis)
S3method(plot,omop_survival_result)
S3method(print,cif_result)
S3method(print,consortium_calibration)
S3method(print,consortium_cohort_diagnostics)
S3method(print,consortium_cross_site_validation)
S3method(print,consortium_explainability)
S3method(print,consortium_manuscript)
S3method(print,consortium_privacy_audit)
S3method(print,consortium_risk_factors)
S3method(print,consortium_scores)
S3method(print,decision_curve_analysis)
S3method(print,federated_consortium)
S3method(print,federated_meta_analysis)
S3method(print,fine_gray_result)
S3method(print,hades_preflight)
S3method(print,omop_scoring_pipeline)
S3method(summary,cif_result)
S3method(summary,consortium_cohort_diagnostics)
S3method(summary,consortium_cross_site_validation)
S3method(summary,consortium_explainability)
S3method(summary,consortium_privacy_audit)
S3method(summary,consortium_scores)
S3method(summary,decision_curve_analysis)
S3method(summary,fine_gray_result)
S3method(to_graphviz,consort_attrition)
S3method(to_latex,consort_attrition)
S3method(to_latex,data.frame)
S3method(to_latex,default)
S3method(to_markdown,consort_attrition)
S3method(to_markdown,data.frame)
S3method(to_markdown,default)
S3method(to_mermaid,consort_attrition)
S3method(to_mermaid,federated_meta_analysis)
S3method(to_tikz,consort_attrition)
S3method(to_typst,consort_attrition)
S3method(to_typst,table1_result)
export(ACUTE_LAB_PANEL)
export(CORE_14_LAB_PANEL)
export(DEFAULT_DATETIME_FORMATS)
export(DEFAULT_LAB_LOINCS)
export(DEFAULT_MEDICATION_CONCEPTS)
export(DEFAULT_PHYSIOLOGIC_BOUNDS)
export(DEFAULT_UNIT_RULES)
export(DEFAULT_VISIT_CONCEPT_GROUPS)
export(DEFAULT_VITAL_CONCEPT_MAPPING)
export(DEFAULT_VITAL_LOINCS)
export(DEFAULT_VITAL_PLAUSIBILITY_FILTERS)
export(POPULATION_PHYSIOLOGIC_BOUNDS)
export(WORST_LAB_DIRECTION)
export(add_missing_indicators)
export(aggregate_concept_sets)
export(as_andromeda)
export(as_plp_arrow)
export(as_plp_data)
export(as_tidymodels_data)
export(assert_exposure_coverage)
export(attach_central_vocabulary)
export(attach_database)
export(audit_cell_suppression)
export(audit_code_list_coverage)
export(audit_combination_products)
export(audit_medication_strategies)
export(auto_remap_unmapped)
export(build_condition_era)
export(build_drug_era)
export(build_end_of_life_cohort)
export(build_manuscript_scaffold)
export(build_mortality_cohort)
export(build_observation_period)
export(build_readmission_cohort)
export(build_safe_source_view)
export(build_schema)
export(build_treatment_episodes)
export(calculate_bedside_scores)
export(calculate_hospital_score)
export(calculate_lace_index)
export(calibrate_estimates)
export(check_cross_database_discrepancy)
export(check_vocabulary_provenance)
export(check_vocabulary_version)
export(cm_database_details)
export(cohort_flow)
export(cohort_from_index_stays)
export(cohort_overlap)
export(combine_cohorts)
export(compare_feature_tables)
export(compile_circe_to_duckdb)
export(compile_phenotype)
export(compute_attrition)
export(condition_criteria)
export(configure_resources)
export(consortium_calculate_scores)
export(consortium_calibration)
export(consortium_close)
export(consortium_cohort_diagnostics)
export(consortium_cross_site_validation)
export(consortium_explainability)
export(consortium_generate_table1)
export(consortium_generate_table2)
export(consortium_multivariable_risk_factors)
export(consortium_patient_overlap)
export(consortium_privacy_audit)
export(consortium_propensity_score)
export(consortium_query)
export(consortium_site_summaries)
export(consortium_survival_meta_analysis)
export(create_cohort)
export(create_federated_consortium)
export(decision_curve_analysis)
export(define_study_cohort)
export(detect_redundant_features)
export(detect_system_ram)
export(domain_profile_names)
export(dqd_summary)
export(drug_criteria)
export(duckdb_to_andromeda)
export(ensure_cohort_tables)
export(estimate_cif)
export(estimate_km_survival)
export(etl_pcornet)
export(everyone)
export(execute_circe_cohort)
export(execute_phenotype)
export(explain_medication_disagreement)
export(export_cdm)
export(export_companion_manifest)
export(export_medication_crosswalk)
export(export_plp_study_package)
export(export_table1)
export(export_to_circe_json)
export(export_to_parquet)
export(export_unmapped_codes)
export(extract_charlson_index)
export(extract_clinical_sequence_tokens)
export(extract_elixhauser_comorbidities)
export(extract_inpatient_labs)
export(extract_measurements)
export(extract_medication_classes)
export(extract_medication_transitions)
export(extract_patient_features)
export(extract_prior_utilization)
export(extract_sparse_concept_matrix)
export(extract_standard_labs)
export(extract_temporal_features)
export(extract_temporal_trajectories)
export(federated_consortium)
export(federated_meta_analysis)
export(filter_bounds)
export(fine_gray_estimator)
export(fit_scoring_pipeline)
export(gdrive_download_latest)
export(gdrive_upload_snapshot)
export(generate_consort_attrition)
export(generate_negative_controls)
export(generate_propensity_weights)
export(generate_site_patient_tokens)
export(generate_synthetic_omop_twin)
export(generate_table1)
export(generate_table2)
export(get_cohort_summary)
export(get_concept_ancestors)
export(get_concept_descendants)
export(get_phenotype_concept_set)
export(hades_preflight)
export(harmonize_anthropometrics)
export(harmonize_measurement_units)
export(import_source_to_concept_map)
export(import_usagi_mappings)
export(install_vectorized_strptime)
export(leakage_scan)
export(list_available_phenotypes)
export(load_care_site)
export(load_cdm_source)
export(load_domain_profile)
export(load_drug_exposure)
export(load_from_bigquery)
export(load_location)
export(load_macros)
export(load_scoring_pipeline)
export(load_vocabulary)
export(load_wide_measurement)
export(match_nearest_neighbor)
export(materialize_concept_features)
export(measurement_criteria)
export(medication_extractor)
export(medication_transitions)
export(missingness_by_outcome)
export(model_concepts)
export(normalize_time_sql)
export(numbers_of_record)
export(observation_period_diagnostics)
export(omop_connect)
export(omop_connect_lakehouse)
export(omop_scoring_pipeline)
export(optimize_concept_set)
export(panel_missingness_audit)
export(phenotype_from_list)
export(phenotype_intersect)
export(phenotype_not)
export(phenotype_to_list)
export(phenotype_union)
export(planned_readmission_filter)
export(plausibility_report)
export(plot_cif)
export(plot_consort_flow)
export(plot_love_plot)
export(plot_multisite_attrition_heatmap)
export(plp_arrow_to_plp_data)
export(plp_database_details)
export(predict_scoring_class)
export(predict_scoring_pipeline)
export(prepare_competing_risks_data)
export(provenance)
export(read_csv_sql)
export(read_parquet_sql)
export(remap_all)
export(remap_cdm_table)
export(resolve_bounds)
export(resolve_concept_set)
export(run_dqd)
export(run_study_grid)
export(sanitize_measurements)
export(sanitize_sql_path)
export(save_scoring_pipeline)
export(scan_document_numbers)
export(scoring_pipeline_out_of_range)
export(sql_copy_to)
export(sql_path_literal)
export(table1_generator)
export(table1_to_quarto)
export(table1_to_typst)
export(to_graphviz)
export(to_latex)
export(to_markdown)
export(to_mermaid)
export(to_tikz)
export(to_typst)
export(validate_scoring_input)
export(validate_table1_reconciliation)
export(vectorized_strptime)
export(vocabulary_preflight)
export(with_cell_suppression)
export(with_differential_privacy)
importFrom(stats,setNames)
importFrom(utils,head)
