.gitignore
LICENSE
README.md
pyproject.toml
.github/workflows/pypi-publish.yml
.github/workflows/python-app-training.yml
.github/workflows/python-app.yml
.github/workflows/testpypi-publish.yml
.vscode/launch.json
.vscode/settings.json
config/trainer_a.yml
config/trainer_b.yml
config/trainer_d.yml
config/trainer_ebi_test.yml
config/trainer_mac.yml
src/RP3Net/__init__.py
src/RP3Net/rp3_main.py
src/RP3Net/rp3_train.py
src/RP3Net.egg-info/PKG-INFO
src/RP3Net.egg-info/SOURCES.txt
src/RP3Net.egg-info/dependency_links.txt
src/RP3Net.egg-info/entry_points.txt
src/RP3Net.egg-info/requires.txt
src/RP3Net.egg-info/top_level.txt
src/RP3Net/fm_cfg/esm2_650m/config.json
src/RP3Net/fm_cfg/esm2_650m/special_tokens_map.json
src/RP3Net/fm_cfg/esm2_650m/tokenizer_config.json
src/RP3Net/fm_cfg/esm2_650m/vocab.txt
src/RP3Net/model/__init__.py
src/RP3Net/model/layers.py
src/RP3Net/model/model.py
src/RP3Net/training/__init__.py
src/RP3Net/training/cli.py
src/RP3Net/training/data.py
src/RP3Net/training/data_emlc.py
src/RP3Net/training/lm.py
src/RP3Net/training/lm_emlc.py
src/RP3Net/training/metrics.py
src/RP3Net/util/__init__.py
src/RP3Net/util/fasta.py
src/RP3Net/util/torch.py
src/RP3Net/util/util.py
tests/__init__.py
tests/rp3_test.py
tests/split_test.py
tests_ebi/__init__.py
tests_ebi/rp3_ebi_test.py
tests_training/__init__.py
tests_training/rp3_public_checkpoint_test.py