Metadata-Version: 2.1
Name: bioio-ome-zarr
Version: 0.9.0
Summary: A BioIO reader plugin for reading Zarr files in the OME format.
Author-email: bioio-devs <brian.whitney@alleninstitute.org>
License: MIT License
Project-URL: Homepage, https://github.com/BrianWhitneyAI/bioio-ome-zarr
Project-URL: Bug Tracker, https://github.com/BrianWhitneyAI/bioio-ome-zarr/issues
Project-URL: Documentation, https://BrianWhitneyAI.github.io/bioio-ome-zarr
Project-URL: User Support, https://github.com/BrianWhitneyAI/bioio-ome-zarr/issues
Classifier: Development Status :: 4 - Beta
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: bioio-base >=0.2.0
Requires-Dist: fsspec >=2022.8.0
Requires-Dist: ome-zarr >=0.8.0
Requires-Dist: xarray >=0.16.1
Provides-Extra: docs
Requires-Dist: m2r2 >=0.2.7 ; extra == 'docs'
Requires-Dist: Sphinx >=4.0.0 ; extra == 'docs'
Requires-Dist: furo >=2022.4.7 ; extra == 'docs'
Requires-Dist: numpydoc ; extra == 'docs'
Requires-Dist: sphinx-copybutton ; extra == 'docs'
Requires-Dist: docutils <0.19,>=0.18 ; extra == 'docs'
Provides-Extra: lint
Requires-Dist: pre-commit >=2.20.0 ; extra == 'lint'
Provides-Extra: test
Requires-Dist: coverage >=5.1 ; extra == 'test'
Requires-Dist: pytest >=5.4.3 ; extra == 'test'
Requires-Dist: pytest-cov >=2.9.0 ; extra == 'test'
Requires-Dist: pytest-raises >=0.11 ; extra == 'test'
Requires-Dist: quilt3 ; extra == 'test'

# bioio-ome-zarr

[![Build Status](https://github.com/BrianWhitneyAI/bioio-ome-zarr/workflows/CI/badge.svg)](https://github.com/BrianWhitneyAI/bioio-ome-zarr/actions)
[![Documentation](https://github.com/BrianWhitneyAI/bioio-ome-zarr/workflows/Documentation/badge.svg)](https://BrianWhitneyAI.github.io/bioio-ome-zarr)

A BioIO reader plugin for reading Zarr files in the OME format.

This plugin is intended to be used in conjunction with [bioio](https://github.com/bioio-devs/bioio)
---

## Installation

**Stable Release:** `pip install bioio-ome-zarr`<br>
**Development Head:** `pip install git+https://github.com/BrianWhitneyAI/bioio-ome-zarr.git`

## Quickstart

```python
from bioio_ome_zarr import Reader 

r = Reader("my-image.zarr")
r.dims
```

## Documentation

For full package documentation please visit [BrianWhitneyAI.github.io/bioio-ome-zarr](https://BrianWhitneyAI.github.io/bioio-ome-zarr).

## Development

See [CONTRIBUTING.md](CONTRIBUTING.md) for information related to developing the code.

**MIT License**
