# Autogenerated by alphashared workflow. Manual edits only if you know what you're doing! Last update: 2026-10-26_10-51-46
alphabase==1.10.2
alphadia-search-rs==1.6.0
alpharaw==0.7.1
argparse==1.4.0
backports-zstd==1.8.0
biopython==1.88
certifi==2026.10.23
cffi==2.1.1
charset-normalizer==3.5.2
click==8.5.0
cloudpickle==3.1.2
clr-loader==0.3.1
contourpy==1.3.3
cycler==0.12.1
dill==0.4.1
directlfq==0.3.3
et-xmlfile==2.0.0
filelock==4.2.4
fonttools==4.67.0
fsspec==2026.9.0
h5py==3.16.0
hf-xet==1.7.0
huggingface-hub==0.36.2
idna==3.20
jinja2==3.1.6
joblib==1.6.0
kiwisolver==1.5.1
lightning-utilities==0.15.3
llvmlite==0.50.0
lxml==6.1.3
markupsafe==3.0.4
matplotlib==3.11.2
mpmath==1.3.0
multiprocess==0.70.19
narwhals==2.27.1
networkx==3.6.1
numba==0.68.0
numpy==1.26.4
nvidia-cublas-cu12==12.4.5.8  ; sys_platform == 'linux'
nvidia-cuda-cupti-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cuda-nvrtc-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cuda-runtime-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cudnn-cu12==9.1.0.70  ; sys_platform == 'linux'
nvidia-cufft-cu12==11.2.1.3  ; sys_platform == 'linux'
nvidia-curand-cu12==10.3.5.147  ; sys_platform == 'linux'
nvidia-cusolver-cu12==11.6.1.9  ; sys_platform == 'linux'
nvidia-cusparse-cu12==12.3.1.170  ; sys_platform == 'linux'
nvidia-cusparselt-cu12==0.6.2  ; sys_platform == 'linux'
nvidia-nccl-cu12==2.21.5  ; sys_platform == 'linux'
nvidia-nvjitlink-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-nvtx-cu12==12.4.127  ; sys_platform == 'linux'
openpyxl==3.1.5
packaging==26.3
pandas==2.3.3
peptdeep==1.5.1
pillow==13.0.0
plotly==7.1.0
psutil==7.2.2
pyahocorasick==2.3.1
pyarrow==25.0.1
pycparser==3.12
pyparsing==3.3.3
pyteomics==4.7.5
python-dateutil==3.0.0
pythonnet==3.2.1
pytz==2026.5
pyyaml==6.0.3
pyzstd==0.20.0
quantselect==0.1.3
regex==2026.9.29
requests==2.34.2
rocket-fft==0.3.3
safetensors==0.8.0
scikit-learn==1.9.1
scipy==1.12.0
seaborn==0.13.2
six==1.17.0
sympy==1.13.1
threadpoolctl==3.7.0
tokenizers==0.22.2
torch==2.6.0
torchmetrics==1.9.0
tqdm==4.70.1
transformers==4.57.6
triton==3.2.0  ; sys_platform == 'linux'
typing-extensions==4.16.0
tzdata==2026.5
urllib3==2.8.0
xxhash==4.0.2
