Metadata-Version: 2.1
Name: bigraph-schema
Version: 0.0.13
Summary: A serializable type schema for compositional systems biology
Home-page: https://github.com/vivarium-collective/bigraph-schema
Author: Eran Agmon, Ryan Spangler
Author-email: agmon.eran@gmail.com, ryan.spangler@gmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Python: >=3.6
Description-Content-Type: text/markdown
License-File: LICENSE
License-File: AUTHORS.md

# Bigraph-schema

[![PyPI version](https://img.shields.io/pypi/v/bigraph-schema.svg)](https://pypi.org/project/bigraph-schema/)
[![Tutorial](https://img.shields.io/badge/GitHub%20Pages-Tutorial-brightgreen)](https://vivarium-collective.github.io/bigraph-schema/notebooks/demo.html)

Welcome to `bigraph-schema` – a library providing a serializable type schema for compositional systems biology 
simulations. This library is an integral component of the broader Process Bigraph project, which seeks to create an 
innovative framework for representing, simulating, and analyzing complex biological systems.

The goal of `bigraph-schema` is to support interoperability and extensibility across compositional modeling, 
facilitating seamless integration with existing and future modeling platforms. This is achieved by establishing a 
standardized and serializable schema for the complex, hierarchical, and multiscale nature of biological systems.

## Installation

To install `bigraph-schema`, you can use pip:

```console
pip install bigraph-schema
```

## Getting Started

To get started with bigraph-schema, check out our resources:

* [Demo notebook](https://vivarium-collective.github.io/bigraph-schema/notebooks/demo.html): An interactive Jupyter notebook providing a hands-on demonstration of the functionality of bigraph-schema.
* [Bigraph Schema Basics Tutorial](https://vivarium-collective.github.io/bigraph-viz/notebooks/basics.html): A comprehensive tutorial covering the essential aspects of the bigraph-schema library. 
This resource will guide you through the core concepts and methods, helping you to master the basic operations.

## License

Bigraph-schema is open-source software released under the [Apache 2 License](https://github.com/vivarium-collective/bigraph-schema/blob/main/LICENSE).


