LICENSE
MANIFEST.in
README.md
setup.py
benchmarks_runner/__init__.py
benchmarks_runner/eval.py
benchmarks_runner/main.py
benchmarks_runner/request.py
benchmarks_runner.egg-info/PKG-INFO
benchmarks_runner.egg-info/SOURCES.txt
benchmarks_runner.egg-info/dependency_links.txt
benchmarks_runner.egg-info/entry_points.txt
benchmarks_runner.egg-info/requires.txt
benchmarks_runner.egg-info/top_level.txt
benchmarks_runner/cli/__init__.py
benchmarks_runner/cli/eval.py
benchmarks_runner/cli/fetch.py
benchmarks_runner/cli/score.py
benchmarks_runner/config/README.md
benchmarks_runner/config/benchmarks.json
benchmarks_runner/config/targets.json
benchmarks_runner/config/CPIC/data.tsv
benchmarks_runner/config/CPIC/data_processing/cpic_data_processing.ipynb
benchmarks_runner/config/CPIC/templates/drug-to-gene.json
benchmarks_runner/config/DrugCentral_creative/README.md
benchmarks_runner/config/DrugCentral_creative/data.tsv
benchmarks_runner/config/DrugCentral_creative/data_full.tsv
benchmarks_runner/config/DrugCentral_creative/get_indications.py
benchmarks_runner/config/DrugCentral_creative/templates/treats.json
benchmarks_runner/config/DrugCentral_subset/README.md
benchmarks_runner/config/DrugCentral_subset/data.tsv
benchmarks_runner/config/DrugCentral_subset/sample_cases.sh
benchmarks_runner/config/DrugCentral_subset/selected_diseases.txt
benchmarks_runner/config/DrugCentral_subset/templates/treats.json
benchmarks_runner/config/DrugMechDB/data.tsv
benchmarks_runner/config/DrugMechDB/templates/three_hop.json
benchmarks_runner/config/GTRx/GTRx_indications.ipynb
benchmarks_runner/config/GTRx/data.tsv
benchmarks_runner/config/GTRx/data_full.tsv
benchmarks_runner/config/GTRx/templates/treats.json
benchmarks_runner/config/IRDiRC/data.tsv
benchmarks_runner/config/IRDiRC/templates/drug_treats_rare_disease.json
benchmarks_runner/config/MostPrescribed_2019/README.md
benchmarks_runner/config/MostPrescribed_2019/data.tsv
benchmarks_runner/config/MostPrescribed_2019/data_not_all.tsv
benchmarks_runner/config/MostPrescribed_2019/data_processing/DrugCondition.txt
benchmarks_runner/config/MostPrescribed_2019/data_processing/add_compound_ids.py
benchmarks_runner/config/MostPrescribed_2019/data_processing/drugs.txt
benchmarks_runner/config/MostPrescribed_2019/data_processing/drugs_with_ids
benchmarks_runner/config/MostPrescribed_2019/data_processing/parse_final.py
benchmarks_runner/config/MostPrescribed_2019/data_processing/source_data.txt
benchmarks_runner/config/MostPrescribed_2019/templates/ameliorates.json
benchmarks_runner/config/MostPrescribed_2019/templates/treats.json
benchmarks_runner/config/OOPD/OOPD_indications.ipynb
benchmarks_runner/config/OOPD/data.tsv
benchmarks_runner/config/OOPD/data_full.tsv
benchmarks_runner/config/OOPD/templates/treats.json
benchmarks_runner/config/RareDisease/RareDisease_indications.ipynb
benchmarks_runner/config/RareDisease/data.tsv
benchmarks_runner/config/RareDisease/data_full.tsv
benchmarks_runner/config/RareDisease/templates/treats.json
benchmarks_runner/utils/__init__.py
benchmarks_runner/utils/asyncio.py
benchmarks_runner/utils/benchmark.py
benchmarks_runner/utils/constants.py
benchmarks_runner/utils/normalize.py