Metadata-Version: 2.1
Name: brainways
Version: 0.1.8.1
Summary: Brainways
Home-page: https://github.com/bkntr/brainways
Author: Ben Kantor
Author-email: benkantor@mail.tau.ac.il
License: GPL-3.0
Project-URL: Bug Tracker, https://github.com/bkntr/brainways/issues
Project-URL: Documentation, https://github.com/bkntr/brainways#README.md
Project-URL: Source Code, https://github.com/bkntr/brainways
Project-URL: User Support, https://github.com/bkntr/brainways/issues
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Topic :: Scientific/Engineering :: Image Processing
Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: aicsimageio[base-imageio]
Requires-Dist: aicspylibczi >=3.0.5
Requires-Dist: bfio
Requires-Dist: bg-atlasapi
Requires-Dist: bioformats-jar
Requires-Dist: click
Requires-Dist: dacite
Requires-Dist: fsspec >=2022.7.1
Requires-Dist: itk-elastix ==0.15.0
Requires-Dist: kornia ==0.6.7
Requires-Dist: natsort
Requires-Dist: numpy
Requires-Dist: opencv-contrib-python-headless
Requires-Dist: opencv-python-headless
Requires-Dist: openpyxl
Requires-Dist: pandas
Requires-Dist: paquo ==0.6.1
Requires-Dist: readlif >=0.6.4
Requires-Dist: scikit-image
Requires-Dist: scikit-learn
Requires-Dist: scikit-posthocs ==0.7.0
Requires-Dist: statsmodels ==0.14.0
Requires-Dist: torch ==1.10.*
Requires-Dist: torchvision ==0.11.*
Requires-Dist: tqdm
Provides-Extra: all
Requires-Dist: brainways-reg-model ; extra == 'all'
Requires-Dist: napari[all] ; extra == 'all'
Requires-Dist: stardist ; extra == 'all'
Requires-Dist: tensorflow ; extra == 'all'
Provides-Extra: dev
Requires-Dist: pre-commit ; extra == 'dev'
Provides-Extra: testing
Requires-Dist: pytest ; extra == 'testing'
Requires-Dist: pytest-cov ; extra == 'testing'
Requires-Dist: tox ; extra == 'testing'

# Brainways

[![License GNU GPL v3.0](https://img.shields.io/pypi/l/brainways.svg?color=green)](https://github.com/bkntr/brainways/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/brainways.svg?color=green)](https://pypi.org/project/brainways)
[![Python Version](https://img.shields.io/pypi/pyversions/brainways.svg?color=green)](https://python.org)
[![tests](https://github.com/bkntr/brainways/workflows/tests/badge.svg)](https://github.com/bkntr/brainways/actions)
[![codecov](https://codecov.io/gh/bkntr/brainways/branch/main/graph/badge.svg)](https://codecov.io/gh/bkntr/brainways)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-brainways)](https://napari-hub.org/plugins/napari-brainways)


* Free software: GNU General Public License v3
* Documentation: https://brainways.readthedocs.io.
* Biorxiv preprint: https://www.biorxiv.org/content/10.1101/2023.05.25.542252v1


## Features

* TODO

## Credits

This package was created with [Cookiecutter] and the [audreyr/cookiecutter-pypackage] project template.

[Cookiecutter]: https://github.com/audreyr/cookiecutter
[audreyr/cookiecutter-pypackage]: https://github.com/audreyr/cookiecutter-pypackage
