.gitignore
.travis.yml
CONTRIBUTING.rst
LICENSE
MANIFEST.in
README.rst
pr-check.sh
requirements-dev.txt
run-checks.sh
run-tests.sh
setup.cfg
setup.py
brainiak/__init__.py
brainiak.egg-info/PKG-INFO
brainiak.egg-info/SOURCES.txt
brainiak.egg-info/dependency_links.txt
brainiak.egg-info/not-zip-safe
brainiak.egg-info/requires.txt
brainiak.egg-info/top_level.txt
brainiak/eventseg/__init__.py
brainiak/eventseg/_utils.c
brainiak/eventseg/_utils.pyx
brainiak/eventseg/event.py
brainiak/factoranalysis/__init__.py
brainiak/factoranalysis/htfa.py
brainiak/factoranalysis/tfa.py
brainiak/factoranalysis/tfa_extension.cpp
brainiak/fcma/__init__.py
brainiak/fcma/classifier.py
brainiak/fcma/cython_blas.c
brainiak/fcma/cython_blas.pyx
brainiak/fcma/voxelselector.py
brainiak/fcma/src/fcma_extension.cc
brainiak/funcalign/__init__.py
brainiak/funcalign/srm.py
brainiak/funcalign/sssrm.py
brainiak/hyperparamopt/__init__.py
brainiak/hyperparamopt/hpo.py
brainiak/reprsimil/__init__.py
brainiak/reprsimil/brsa.py
brainiak/utils/__init__.py
brainiak/utils/fmrisim.py
brainiak/utils/grey_matter_mask.npy
brainiak/utils/utils.py
docs/.gitignore
docs/Makefile
docs/conf.py
docs/index.rst
docs/_static/placeholder.txt
docs/_templates/placeholder.txt
examples/eventseg/requirements.txt
examples/eventseg/simulated_data.py
examples/factoranalysis/README.rst
examples/factoranalysis/get_tfa_input_from_nifti.py
examples/factoranalysis/latent_factor_from_htfa.py
examples/factoranalysis/latent_factor_from_tfa.py
examples/factoranalysis/requirements.txt
examples/factoranalysis/run_mpi_htfa.sh
examples/fcma/classification.py
examples/fcma/file_io.py
examples/fcma/voxel_selection.py
examples/funcalign/download-data.sh
examples/funcalign/requirements.txt
examples/funcalign/srm_image_prediction_example.ipynb
examples/funcalign/srm_image_prediction_example.py
examples/funcalign/sssrm_image_prediction_example.py
examples/hyperparamopt/hpo_example.py
examples/hyperparamopt/requirements.txt
examples/reprsimil/brsa_representational_similarity_estimate_example.ipynb
examples/reprsimil/example_design.1D
examples/utils/fmrisim_example.py
examples/utils/requirements.txt
tests/conftest.py
tests/eventseg/test_event.py
tests/factoranalysis/test_htfa.py
tests/factoranalysis/test_tfa.py
tests/fcma/test_classification.py
tests/fcma/test_voxel_selection.py
tests/funcalign/test_srm.py
tests/funcalign/test_sssrm.py
tests/hyperparamopt/test_hpo.py
tests/reprsimil/example_design.1D
tests/reprsimil/test_brsa.py
tests/utils/example_design.1D
tests/utils/test_fmrisim.py
tests/utils/test_utils.py