.gitignore
LICENSE.txt
README.md
blast-ct.png
pyproject.toml
requirements.txt
blast_ct/__init__.py
blast_ct/console_tool.py
blast_ct/inference.py
blast_ct/read_config.py
blast_ct/train.py
blast_ct.egg-info/PKG-INFO
blast_ct.egg-info/SOURCES.txt
blast_ct.egg-info/dependency_links.txt
blast_ct.egg-info/entry_points.txt
blast_ct.egg-info/requires.txt
blast_ct.egg-info/top_level.txt
blast_ct/data/config.json
blast_ct/data/data.csv
blast_ct/data/localisation_files/atlas_labels.csv
blast_ct/data/localisation_files/atlas_template_space.nii.gz
blast_ct/data/localisation_files/ct_template.nii.gz
blast_ct/data/localisation_files/ct_template_mask.nii.gz
blast_ct/data/saved_models/model_1.torch_model
blast_ct/data/saved_models/model_10.torch_model
blast_ct/data/saved_models/model_11.torch_model
blast_ct/data/saved_models/model_12.torch_model
blast_ct/data/saved_models/model_13.torch_model
blast_ct/data/saved_models/model_2.torch_model
blast_ct/data/saved_models/model_3.torch_model
blast_ct/data/saved_models/model_4.torch_model
blast_ct/data/saved_models/model_5.torch_model
blast_ct/data/saved_models/model_6.torch_model
blast_ct/data/saved_models/model_7.torch_model
blast_ct/data/saved_models/model_8.torch_model
blast_ct/data/saved_models/model_9.torch_model
blast_ct/data/scans/scan_0/scan_0_image.nii.gz
blast_ct/data/scans/scan_0/scan_0_sampling_mask.nii.gz
blast_ct/data/scans/scan_0/scan_0_segmentation.nii.gz
blast_ct/localisation/__init__.py
blast_ct/localisation/localise_lesions.py
blast_ct/localisation/register_to_template.py
blast_ct/models/__init__.py
blast_ct/models/base.py
blast_ct/models/deepmedic.py
blast_ct/nifti/__init__.py
blast_ct/nifti/augmention.py
blast_ct/nifti/datasets.py
blast_ct/nifti/patch_samplers.py
blast_ct/nifti/rescale.py
blast_ct/nifti/savers.py
blast_ct/nifti/transformation.py
blast_ct/trainer/__init__.py
blast_ct/trainer/hooks.py
blast_ct/trainer/inference.py
blast_ct/trainer/logger.py
blast_ct/trainer/losses.py
blast_ct/trainer/metrics.py
blast_ct/trainer/model_trainer.py