Metadata-Version: 2.4
Name: phasegen
Version: 2.0.0
Summary: Computation and inference on exact solutions of coalescent distributions under diverse demographic scenarios.
License: GPL-3.0-or-later
License-File: LICENSE
Author: Janek Sendrowski
Author-email: sendrowski.janek@gmail.com
Requires-Python: >=3.10,<3.14
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Requires-Dist: dill (>=0.3.8)
Requires-Dist: jsonpickle (>=3.0.4,<4.0.0)
Requires-Dist: matplotlib (>=3.8.4,<4.0.0)
Requires-Dist: multiprocess (>=0.70.16,<0.71.0)
Requires-Dist: numba (>=0.59)
Requires-Dist: numpy (>=1.26.4)
Requires-Dist: pandas (>=2.2.2,<3.0.0)
Requires-Dist: pyyaml (>=6.0.1,<7.0.0)
Requires-Dist: scipy (>=1.13.0,<2.0.0)
Requires-Dist: seaborn (>=0.13.2,<0.14.0)
Requires-Dist: sfsutils-popgen (>=0.1.0b2,<0.2.0) ; python_version < "3.11"
Requires-Dist: sfsutils-popgen (>=1.0.0,<2.0.0) ; python_version >= "3.11"
Requires-Dist: tqdm (>=4.66.2,<5.0.0)
Requires-Dist: typing-extensions (>=4.11.0,<5.0.0)
Description-Content-Type: text/markdown

# PhaseGen  <img align="right" width="100" src="https://raw.githubusercontent.com/Sendrowski/PhaseGen/master/docs/logo.png">

[![Tests](https://github.com/Sendrowski/PhaseGen/actions/workflows/run-tests.yml/badge.svg?branch=master)](https://github.com/Sendrowski/PhaseGen/actions/workflows/run-tests.yml)
[![codecov](https://codecov.io/gh/Sendrowski/PhaseGen/graph/badge.svg?token=RMCUGD6CAX)](https://codecov.io/gh/Sendrowski/PhaseGen)
[![Documentation Status](https://readthedocs.org/projects/phasegen/badge/?version=latest)](https://phasegen.readthedocs.io/en/latest/?badge=latest)
[![PyPI version](https://badge.fury.io/py/phasegen.svg)](https://badge.fury.io/py/phasegen)
[![Conda Version](https://img.shields.io/conda/vn/conda-forge/phasegen.svg)](https://anaconda.org/conda-forge/phasegen)
[![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)
[![Downloads](https://static.pepy.tech/badge/phasegen)](https://pepy.tech/project/phasegen)
[![DOI](https://img.shields.io/badge/DOI-10.1093%2Fgenetics%2Fiyaf135-blue)](https://doi.org/10.1093/genetics/iyaf135)

``phasegen`` is a package for computation and inference on exact solutions of coalescent distributions under diverse demographic scenarios. ``phasegen`` leverages phase-type theory and supports a wide range of demographic models and coalescent tree statistics.

Please see the [documentation](https://phasegen.readthedocs.io/en/latest/) for all the details.

