.coveragerc
.gitignore
CITATION.cff
LICENSE
MANIFEST.in
README.md
codemeta.json
conftest.py
mkdocs.yml
pyproject.toml
requirements-docs.txt
requirements.txt
setup.py
.github/export_sdist_name.py
.github/workflows/codecov.yml
.github/workflows/docs.yml
.github/workflows/package.yml
SuchTree/MuchTree.c
SuchTree/MuchTree.cpython-313-x86_64-linux-gnu.so
SuchTree/MuchTree.pyx
SuchTree/__init__.py
SuchTree/__version__.py
SuchTree/exceptions.py
SuchTree.egg-info/PKG-INFO
SuchTree.egg-info/SOURCES.txt
SuchTree.egg-info/dependency_links.txt
SuchTree.egg-info/requires.txt
SuchTree.egg-info/top_level.txt
SuchTree/tests/gopher.tree
SuchTree/tests/lice.tree
SuchTree/tests/links.csv
SuchTree/tests/support_comment.tree
SuchTree/tests/support_float.tree
SuchTree/tests/support_int.tree
SuchTree/tests/test.matrix
SuchTree/tests/test.tree
SuchTree/tests/test_SuchLinkedTrees.py
SuchTree/tests/test_SuchTree.py
SuchTree/tests/test_new_api.py
data/SimulateData.ipynb
data/spectral_properties.csv
data/studies.json
data/bigtrees/README.md
data/bigtrees/guest.tree
data/bigtrees/host.tree
data/bigtrees/links.csv
data/bigtrees/ml.tree
data/bigtrees/nj.tree
data/dove-louse/dove-louse.gif
data/dove-louse/dove-louse.ipynb
data/fish-worm/association_concat.txt
data/fish-worm/cichlido_association_CopyCat.txt
data/fish-worm/fish-worm.ipynb
data/fish-worm/fish-worm.pdf
data/fish-worm/guest.tree
data/fish-worm/host.tree
data/fish-worm/host_vs_parasite_GBIDs.csv
data/fish-worm/links.csv
data/gopher-louse/Gopher-Louse.ipynb
data/gopher-louse/gopher-louse-associations.txt
data/gopher-louse/gopher.fasta
data/gopher-louse/gopher.tree
data/gopher-louse/lice.fasta
data/gopher-louse/lice.tree
data/gopher-louse/links.csv
data/plant-pollinators/references.tsv
data/plant-pollinators/arr1/animal.tree
data/plant-pollinators/arr1/arr1_links.csv
data/plant-pollinators/arr1/plant.tree
data/plant-pollinators/arr2/animal.tree
data/plant-pollinators/arr2/arr2_links.csv
data/plant-pollinators/arr2/plant.tree
data/plant-pollinators/arr3/animal.tree
data/plant-pollinators/arr3/arr3_links.csv
data/plant-pollinators/arr3/plant.tree
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data/plant-pollinators/bahe/bahe_links.csv
data/plant-pollinators/bahe/plant.tree
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data/plant-pollinators/bair/bair_links.csv
data/plant-pollinators/bair/plant.tree
data/plant-pollinators/beeh/animal.tree
data/plant-pollinators/beeh/beeh_links.csv
data/plant-pollinators/beeh/plant.tree
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data/plant-pollinators/hrat/animal.tree
data/plant-pollinators/hrat/hrat_links.csv
data/plant-pollinators/hrat/plant.tree
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data/plant-pollinators/inpk/plant.tree
data/plant-pollinators/kant/animal.tree
data/plant-pollinators/kant/kant_links.csv
data/plant-pollinators/kant/plant.tree
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data/plant-pollinators/kevn/plant.tree
data/plant-pollinators/lope/animal.tree
data/plant-pollinators/lope/lope_links.csv
data/plant-pollinators/lope/plant.tree
data/plant-pollinators/lopez-fig-wasp/Lopez-Vaamonde.ipynb
data/plant-pollinators/lopez-fig-wasp/guest.tree
data/plant-pollinators/lopez-fig-wasp/host.tree
data/plant-pollinators/lopez-fig-wasp/lopez-fig-wasp_links.csv
data/plant-pollinators/mack/animal.tree
data/plant-pollinators/mack/mack_links.csv
data/plant-pollinators/mack/plant.tree
data/plant-pollinators/med1/animal.tree
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data/plant-pollinators/med1/plant.tree
data/plant-pollinators/med2/animal.tree
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data/plant-pollinators/med2/plant.tree
data/plant-pollinators/memm/animal.tree
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data/plant-pollinators/moma/plant.tree
data/plant-pollinators/mont/animal.tree
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data/plant-pollinators/mott/animal.tree
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data/plant-pollinators/nnog/plant.tree
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data/plant-pollinators/perc/animal.tree
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data/plant-pollinators/perc/plant.tree
data/plant-pollinators/rabr/animal.tree
data/plant-pollinators/rabr/plant.tree
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