Metadata-Version: 1.1
Name: bika.lims
Version: 3.1.9
Summary: Bika LIMS
Home-page: www.bikalims.org
Author: Naralabs
Author-email: info@naralabs.com
License: AGPL
Description: Bika LIMS
        =========
        
        v3.1.9 (2015-10-8)
        
        The meaning of Gaob
        -------------------
        
        In the tradition of Chief Inkosi Bika LIMS 2 using a title for a release, this
        edition is code-named Gaob Bika LIMS 3. Gaob, King, is taken from Khoi San Nama,
        language of the world's first people.
        
        Installation
        ------------
        
        * `Installing Bika LIMS <https://github.com/bikalabs/Bika-LIMS/wiki/Bika-LIMS-Installation>`_
        
        Documentation
        -------------
        
        * `User Manual <http://demo.bikalabs.com/knowledge-centre/manual/bika-3-user-manual>`_
        * `GitHub Wiki <http://github.com/bikalabs/Bika-LIMS/wiki>`_
        
        Feedback and support
        --------------------
        
        * Bika Users List: `bika-users <http://lists.sourceforge.net/lists/listinfo/bika-users>`_
        * Bika Developers List: `bika-developers <http://lists.sourceforge.net/lists/listinfo/bika-developers>`_
        * LIMS design List: `lims-design <https://groups.google.com/forum/?hl=en#%21forum/bika-design>`_
        * Issue Tracker: `http://jira.bikalabs.com/ <http://jira.bikalabs.com>`_
        * IRC: `irc://freenode.net/#bika <irc://freenode.net/#bika>`_
        
        Installing Bika LIMS
        ====================
        
        The process should be similar for all systems on which Plone is supported.
        
        Linux Installation Steps
        ------------------------
        
        1. Plone and Bika LIMS have some system dependencies
        
            The following list of packages need to be installed.  The package list is valid
            for Ubuntu 14.04. If you use a different distribution, you may need to find the
            versions of these packages which are provided with your system. ::
        
               sudo apt-get install python-dev build-essential libffi-dev libpcre3-dev gcc
               sudo apt-get install autoconf libtool pkg-config zlib1g-dev git-core libssl-dev
               sudo apt-get install libexpat1-dev libxslt1.1 gnuplot libpcre3 libcairo2
               sudo apt-get install libpango1.0-0 libgdk-pixbuf2.0-0
        
        2. Install Plone
        
            Download the latest stable version of the
            `Plone Unified Installer <http://plone.org/products/plone/releases>`_.
            You should also read the
            `Plone Installation Documentation <http://docs.plone.org/manage/installing/index.html>`_.
        
            A basic command for installing a development environment in Linux::
        
                ./install.sh --target=/path/to/Plone --build-python --static-lxml zeo
        
        3. Add Bika LIMS to your buildout.cfg
        
            Change directory to ``Plone/zeocluster``, and edit ``buildout.cfg``.
        
            Find the section beginning with ``eggs =``, and add ``bika.lims`` to the existing
            entries::
        
                eggs =
                    Plone
                    Pillow
                    bika.lims
        
            Indentation in buildout.cfg is important, and should be kept uniform for all lines.
        
            Save the file, and then run bin/buildout again.  Buildout will download and install
            all remaining dependencies.
        
            If the download is interrupted, simply run bin/buildout again.  The process will
            be resumed.
        
            Spurious errors may occur while running buildout, and may be safely ignored. Verify
            successful build from the output of the buildout script, which should  include a
            list of found versions like this::
        
                *************** PICKED VERSIONS ****************
                [versions]
                Babel = 1.3
                CairoSVG = 1.0.7
                Products.ATExtensions = 1.1
                Products.AdvancedQuery = 3.0.3
                PyYAML = 3.11
                Pygments = 1.6
                Pyphen = 0.9.1
                Werkzeug = 0.9.4
                argh = 0.24.1
                bpython = 0.13
                cairocffi = 0.5.3
                cffi = 0.8.2
                collective.progressbar = 0.5
                collective.wtf = 1.0b9
                cssselect = 0.9.1
                gpw = 0.2
                i18ndude = 3.3.3
                magnitude = 0.9.3
                pathtools = 0.1.2
                plone.api = 1.1.0
                plone.jsonapi.core = 0.4
                *************** /PICKED VERSIONS ***************
        
            If the buildout finished successfully, an 'adminPassword.txt' will have been
            created automatically inside the Plone instance folder. It contains the super-user
            credentials you'll need to create the Bika site.
        
        4. Test your setup
        
            First, start the ZEO Server::
        
                bin/plonectl zeoserver start
        
            Then you must start one ZEO Client in the foreground, noting error messages if any
            and taking corrective action if so::
        
                bin/plonectl client1 fg
        
            If you see ``INFO Zope Ready to handle requests`` then the server is running.
            Press Control+C to stop the foreground client.
        
            To start the Plone server normally, use the following command::
        
                bin/plonectl start
        
        5. Add a new Plone/Bika instance.
        
            Open a browser and go to http://localhost:8080/.  Select "Add Plone Site",
            and ensure that the Bika LIMS option is checked, then submit the form.
        
        Windows Installation Steps
        --------------------------
        
        1. Download and Install Plone
        
            Currently Bika LIMS for Windows requires a Plone 4.3.1 installation.
        
            * Download the `Windows Installer <http://plone.org/products/plone/releases/4.3.1>`_
            * Execute the installer and follow through the steps
        
            For this guide we will assume the default location of `C:\Plone43`
        
            For more information visit: http://docs.plone.org/manage/installing/index.html
        
        2. Installing Bika LIMS
        
            1. Open ``C:\Plone43\buildout.cfg`` in a text editor
        
            2. Find the section beginning with ``eggs =``, and add ``bika.lims`` to the existing
               entries::
        
                eggs =
                    Plone
                    Pillow
                    bika.lims
        
            3. Run buildout from cmd (press ``⊞ Win``, type ``cmd``, press ``↵ Enter``)::
        
                C:> cd C:\Plone43
                C:\Plone43> bin\buildout.exe
        
            4. A successful buildout should output::
        
                Updating run-instance.
                Updating service.
                *************** PICKED VERSIONS ****************
                [versions]
                bika.lims = 3.0
                cairocffi = 0.5.4
                cairosvg = 1.0.7
                cssselect = 0.9.1
                gpw = 0.2
                magnitude = 0.9.3
                products.advancedquery = 3.0.3
                products.atextensions = 1.1
                pycparser = 2.10
                pyphen = 0.9.1
                *************** /PICKED VERSIONS ***************
        
            If you see the following errors: ``Error: Couldn't install: cffi 0.8.2`` or
            ``Error 5: Access is denied`` refer to Troubleshooting below.
        
        3. Setting up Plone Services
        
            1. Run cmd as Administrator (press ``⊞ Win``, type: ``cmd``, press ``CTRL``+``⇧ Shift``+``↵ Enter``)
        
            2. Navigate to the Plone root directory::
        
                C:\> cd C:\Plone43
        
            3. Install, Start and bring your newly created instance to the Foreground
               This should stop the default Plone 4.3 Service::
        
                   C:\Plone43> bin\instance.exe install
                   C:\Plone43> bin\instance.exe start
                   C:\Plone43> bin\instance.exe fg
        
               If you see ``INFO Zope Ready to handle requests`` then the server is running
        
        4. Add a new Plone/Bika instance.
        
            Open a browser and go to http://localhost:8080/.  Select "Add Plone Site",
            and ensure that the Bika LIMS option is checked, then submit the form.
        
        Upgrading Bika LIMS
        -------------------
        
        If a new release of the LIMS is made available, the following procedure will
        upgrade your existing installation to use the new packages.
        
        1. Backup
        
            Stop Plone, and make a full backup of your instance before continuing::
        
                bin/plonectl stop
                bin/fullbackup
        
        2. Buildout
        
            Run buildout with the "-n" option, to retreive the latest version of Bika
            LIMS and it's dependencies::
        
                bin/buildout -n
        
        3. Restart Plone
        
            Just as during the installation, it's useful to start a single zeo client
            in the foreground to check for errors:
        
                bin/plonectl client1 stop
                bin/plonectl client1 fg
        
            To restart Plone issue a command like this:
        
                bin/plonectl restart
        
        4. Migrate
        
            Go to site-setup, and click ``Add-ons``.  Find Bika LIMS in the list of
            activated addons, and click the ``bika.lims`` upgrade button.
        
        Installing Bika-LIMS source
        ---------------------------
        
        You should already have Plone and Bika LIMS installed.  The paths and commands
        below are for Linux, but following along in windows is simple.
        
        1. Download source::
        
            cd Plone/zeocluster/src
            git clone https://github.com/bikalabs/Bika-LIMS.git bika.lims
        
        2. Select a git branch::
        
            We use git-flow to manage the git repository, with some quirks.  The ``next``
            branch contains code for the next hotfix or release, and ``develop`` contains
            unreleased code merged from ``feature/*`` branches. ::
        
                git checkout develop
        
        3. Edit ``buildout.cfg``::
        
            develop =
                src/bika.lims
        
        4. Restart Plone
        
            bin/plonectl restart all
        
        The Bika LIMS distribution in Plone/buildout-cache/eggs/bika.lims* will now be
        ignored by Plone, and the copy in src/bika.lims is used instead.
        
        Troubleshooting
        ---------------
        
            (Windows) Dependencies ::
        
                You need to install some dependencies manually
                Download and install _bika_dependencies(Plone 4.3.1).exe_ from https://github.com/zylinx/bika.dependencies
                This fixes the fact that Plone's buildout cannot compile the libraries required by weasyprint.
                It installs the pre-compiled binaries into System32 and Plone's installation folder instead.
        
            (Windows) Privileges ::
        
                Open ``Explorer`` >> Navigate to ``C:\`` >> Right-Click on the ``Plone43`` directory >> select ``roperties``
                Select the ``Security`` Tab >>  Click ``Edit``  >> Check ``Full Control`` Allow for necessary User / Group
                Click  ``Apply``
        
            (Windows) If you are having trouble starting ``bin\instance.exe fg`` as follows::
        
                The program seems already to be running. If you believe not,
                check for dangling .pid and .lock files in var/.
        
                * You can try the following steps:
        
                    -Find the running process id by opening the .pid file within your instance's var/ directory.
                    -Open the Windows Task Manager and stop the running process with the above identifier.
                    -Delete all .pid and .lock files in your instance's var/ directory.
                    -Start your instance.
        
                * OR::
        
                    -Run services.msc
                    -Search for Plone 4.3
                    -Try Starting or Stopping it along with your instance
        
            To empty/reset the database, run the following::
        
                rm -rf var/filestorage
                bin/buildout
        
            If your admin user does not exist or you forget the password::
        
                bin/plonectl adduser admin admin
        
            AttributeError: type object 'IIdServer' has no attribute '__iro__' ::
        
                * The code for "bika.lims" not installed or not included
                * Running buildout again usually fixes this
        
        
        Log errors to sentry.bikalabs.com
        ---------------------------------
        
        Add raven to your buildout.cfg in the ``eggs =`` section::
        
            eggs =
                ...
                raven
        
        Then add the following snippet to your [instance] section.  If you are using a
        ZEO configuration, add this to all [clientX] sections::
        
            event-log-custom =
                %import raven.contrib.zope
                <logfile>
                  path ${buildout:directory}/var/client1/event.log
                  level INFO
                  max-size 5 MB
                  old-files 5
                </logfile>
                <sentry>
                  dsn http://90723864025d4520b084acee225ddb8a:f9f7dd0163a74fbeac4e24a5123b3d39@sentry.bikalabs.com/2
                  level ERROR
                </sentry>
        
        Add raven 4.0.4 into [versions] section::
        
            [versions]
                ...
                raven = 4.0.4
        
        Run bin/buildout, and restart Plone.
        3.1.9 (2015-10-8)
        ------------------
        LIMS-2068: LIMS-2068 Urgent. Analysis Catgories don't expand
        LIMS-1875: Able to deactivate instruments and reference samples without logging in
        LIMS-2049: Displaying lists doesn't work as expected in 319
        LIMS-1908: Navigation tree order
        LIMS-1543: Add "Security Seal Intact Y/N" checkbox for partition container
        LIMS-1544: Add "File attachment" field on Sample Point
        LIMS-1949: Enviromental conditions
        LIMS-1549: Sampling Round Templates privileges and permissions
        LIMS-1564: Cancelling a Sampling Round
        LIMS-2020: Add Sampling Round - Department not available for selection
        LIMS-1545: Add "Composite Y/N" checkbox on AR Template
        LIMS-1547: AR Templates tab inside Sampling Round Template
        LIMS-1561: Editing a Sampling Round
        LIMS-1558: Creating Sampling Rounds
        LIMS-1965: Modified default navtree order for new installations
        LIMS-1987: AR Invoice tab should not be shown if pricing is toggled off
        LIMS-1523: Site Error when transitioning AR from 'Manage Analyses' or 'Log' tab
        LIMS-1970: Analyses with AR Specifications not displayed properly in AR Add form
        LIMS-1969: AR Add error when "Categorise analysis services" is disabled
        LIMS-1397: Fix Client Title accessor to prevent catalog error when data is imported
        LIMS-1996: On new system with no instrument data is difficult to get going.
        LIMS-2005: Click on Validations tab of Instruments it give error
        LIMS-1806: Instrument Interface. AQ2. Seal Analytical - Error
        LIMS-2002: Error creating Analysis Requests from batch.
        LIMS-1996: On new system with no instrument data it is difficult to get going. The warnings could be confusing
        LIMS-1312: Transposed Worksheet view, ARs in columns
        LIMS-1760: Customised AR Import spreadsheets (refactored, support importing to Batch)
        LIMS-1548: Client-specific Sampling Round Templates
        LIMS-1546: Sampling Round Template Creation and Edit view
        LIMS-1944: Prevent concurrent form submissions from clobbering each other's results
        LIMS-1930: AssertionError: Having an orphan size, higher than batch size is undefined
        LIMS-1959: Not possible to create an AR
        LIMS-1956: Error upgrading to 319
        LIMS-1934: Hyperlinks in invoices
        LIMS-1943: Stickers preview and custom stickers templates support
        LIMS-1855: Small Sticker layout. QR-code capabilities
        LIMS-1627: Pricing per Analysis Profile
        HEALTH-279: AS IDs to be near top of page. Columns in AS list
        LIMS-1625: Instrument tab titles and headers do not correspond
        LIMS-1924: Instrument tab very miss-titled. Internal Calibration Tests
        LIMS-1922: Instrument out of date typo and improvement
        HEALTH-175: Supplier does not resolve on Instrument view page
        LIMS-1887: uniquefield validator doesn't work properly
        LIMS-1869: Not possible to create an Analysis Request
        LIMS-1867: Auto-header, auto-footer and auto-pagination in results reports
        LIMS-1743: Reports: ISO (A4) or ANSI (letter) pdf report size
        LIMS-1695: Invoice export function missing
        LIMS-1812: Use asynchronous requests for expanding categories in listings
        LIMS-1811: Refactor AR Add form Javascript, and related code.
        LIMS-1818: Instrument Interface. Eltra CS-2000
        LIMS-1817: Instrument Interface. Rigaku Supermini XRF
        - New System Dashboard for LabManagers and Admins
        
        3.1.8.3 (2015-10-01)
        --------------------
        LIMS-1755: PDF writer should be using a world-writeable tmp location
        LIMS-2041: Resolve ${analysis_keyword) in instrument import alert.
        
        3.1.8.2 (2015-09-27)
        --------------------
        LIMS-1996: On new system with no instrument data is difficult to get going.
        LIMS-1760: Customised AR Import spreadsheets (refactored, support importing to Batch)
        LIMS-1930: AssertionError: Having an orphan size, higher than batch size is undefined
        LIMS-1818: Instrument Interface. Eltra CS-2000
        LIMS-1817: Instrument Interface. Rigaku Supermini XRF
        LIMS-2037: Gracefully anticipate missing analysis workflow history
        LIMS-2035: Prevent Weasyprint flooding due to asyncronous publish
        
        3.1.8.1 (2015-06-23)
        --------------------
        LIMS-1806: Instrument Interface. AQ2. Seal Analytical - Error
        LIMS-1760: Customised AR Import spreadsheets (refactored, support importing to Batch)
        Fix portlets.xml for Plone 4.3.6 compatibility
        
        3.1.8 (2015-06-03)
        ------------------
        LIMS-1923: Typo InstrumentCalibration
        HEALTH-287: Hyperlink in Instrument messages
        LIMS-1929: Translation error on Instrument Document page
        LIMS-1928 Asset Number on Instruments' Certificate tab should use Instrument's default
        LIMS-1929: Translation error on Instrument Document page
        LIMS-1773: Instrument. Thermo Fisher ELISA Spectrophotometer
        LIMS-1697: Error updating bika.lims 317 to 318 via quickinstaller
        LIMS-1820: QC Graphs DateTime's X-Axis not well sorted
        LIMS-280 : System IDs starting from a specific value
        LIMS-1819: Bika LIMS in footer, not Bika Lab Systems
        LIMS-1808: Uncertainty calculation on DL
        LIMS-1522: Site Error adding display columns to sorted AR list
        LIMS-1705: Invoices. Currency unit overcooked
        LIMS-1806: Instrument Interface. AQ2. Seal Analytical
        LIMS-1770: FIAStar import 'no header'
        LIMS-1771: Instrument. Scil Vet abc Plus
        LIMS-1772: Instrument. VetScan VS2
        LIMS-1507: Bika must notify why is not possible to publish an AR
        LIMS-1805: Instrument Interface. Horiba JY ICP
        LIMS-1710: UnicodeEncode error while creating an Invoice from AR view
        WINE-44: Sample stickers uses Partition ID only if ShowPartitions option is enabled
        LIMS-1634: AR Import fields (ClientRef, ClientSid) not importing correctly
        LIMS-1474: Disposed date is not shown in Sample View
        LIMS-1779: Results report new fields and improvements
        LIMS-1775: Allow to select LDL or UDL defaults in results with readonly mode
        LIMS-1769: Allow to use LDL and UDL in calculations.
        LIMS-1700: Lower and Upper Detection Limits (LDL/UDL). Allow manual input
        LIMS-1379: Allow manual uncertainty value input
        LIMS-1324: Allow to hide analyses in results reports
        LIMS-1754: Easy install for LIMS' add-ons was not possible
        LIMS-1741: Fixed unwanted overlay when trying to save supply order
        LIMS-1748: Error in adding supply order when a product has no price
        LIMS-1745: Retracted analyses in duplicates
        LIMS-1629: Pdf reports should split analysis results in different pages according to the lab department
        Some new ID Generator's features, as the possibility of select the separator type
        LIMS-1738: Regression. 'NoneType' object has no attribute 'getResultsRangeDict'
        LIMS-1739: Error with results interpretation field of an AR lacking departments
        LIMS-1740: Error when trying to view any Sample
        LIMS-1724: Fixed missing start and end dates on reports
        LIMS-1628: There should be a results interpretation field per lab department
        LIMS-1737: Error when adding pricelists of lab products with no volume and unit
        LIMS-1696: Decimal mark conversion is not working with "<0,002" results type
        LIMS-1729: Analysis Specification Not applying to Sample when Selected
        LIMS-1507: Do not cause exception on SMTPServerDisconnect when publishing AR results.
        
        
        3.1.7 (2015-02-26)
        ------------------
        LIMS-1693: Error trying to save a new AR
        LIMS-1570: Instrument interface: Roche Cobas Taqman 48
        LIMS-1520: Allow to invalidate verified ARs
        LIMS-1690: Typo. Instrument page
        LIMS-1688: After AR invalidation, ARs list throws an error
        LIMS-1569: Instrument interface: Beckman Coulter Access 2
        LIMS-1689: Error while creating a new invoice batch
        LIMS-1266: Sampling date format error
        LIMS-1365: Batch search parameters on Work sheets/Work sheets insides Batches
        LIMS-1428: After receiving a sample with Sampling Workflow enable is not possible to input results
        LIMS-1540: When accent characters are used in a "Sample Type" name, it is not possible to create a new AR
        LIMS-1617: Error with bin/test
        LIMS-1571: Instrument interface: Sysmex XS-1000i
        LIMS-1574: Fixed AR and Analysis attachments
        LIMS-1670: Fixed windows incompatibility in TAL (referencewidget.pt)
        LIMS-1594: Added option to select landing page for clients in configuration registry
        LIMS-1594: Re-ordered tabs on Client home page
        LIMS-1520: Allow to invalidate verified ARs
        LIMS-1539: Printable Worksheets. In both AR by row or column orientations
        LIMS-1199: Worksheet totals in WS lists
        LIMS-257: Set Blank and Warning icons in Reference Sample main view
        LIMS-1636: Batch Sample View crash
        LIMS-1524: Invalidate email does not have variables populated
        LIMS-1572: Instrument interface: Sysmex XS-500i
        LIMS-1575: Thermo Arena 20XT
        LIMS-1423: Save details when AR workflow action kicked off
        LIMS-1624: Import default test.xlsx fails
        LIMS-1614: Error when selecting Analysis Administration Tab after receiving a sample with Sampling Workflow enabled
        LIMS-1605: Tescan TIMA interface
        LIMS-1604: BioDrop uLite interface
        LIMS-1603: Life Technologies Qubit interface
        LIMS-1517: Storage field tag untranslated?
        LIMS-1518: Storage Location table
        LIMS-1527: CC Contact on AR view (edit) offers all contacts in system
        LIMS-1536: Add button [Add], to alow quickly addings in referencewidget
        LIMS-1587: Better support for extension of custom sample labels
        LIMS-1622: Version Check does not correctly check cache
        LIMS-1623: Implement bika-frontpage as a BrowserView
        
        
        3.1.6 (2014-12-17)
        ------------------
        LIMS-1530: Scrambled Analysis Category order in Published Results
        LIMS-1529: Error while inserting an AR with container-based partitioning is required
        LIMS-1460: Additional field in AR for comments or results interpretation
        LIMS-1441: An error message related to partitions unit is shown when selecting analysis during AR creation
        LIMS-1470: AS Setup. File attachment field tag is missing
        LIMS-1422: Results doesn't display yes/no once verified but 1 or 0
        LIMS-1486: Typos in instrument messages
        LIMS-1498: Published Results not Showing for Logged Clients
        LIMS-1445: Scientific names should be written in italics in published reports
        LIMS-1389: Units in results publishing should allow super(sub)script format, for example in cm2 or m3
        LIMS-1500: Alere Pima's Instrument Interfice
        LIMS-1457: Exponential notation in published AR pdf should be formatted like a×10^b instead of ae^+b
        LIMS-1334: Calculate result precision from Uncertainty value
        LIMS-1446: After retracting a published AR the Sample gets cancelled
        LIMS-1390: More workflow for Batches
        LIMS-1378: Bulking up Batches
        LIMS-1479: new-version and upgrade-steps should be python viewlets
        LIMS-1362: File attachment uploads to Batches
        LIMS-1404: New Batch attributes (and their integration with existing ones on Batch views)
        LIMS-1467: Sample Point Lookup doesn't work on AR modify
        LIMS-1363: Batches per Client
        LIMS-1405: New Sample and AR attributes
        LIMS-1085: Allow Clients to add Attachments to ARs
        LIMS-1444: In AR published report accredited analysis services are not marked as accredited
        LIMS-1443: In published reports the publishing date is not shown in the pdf
        LIMS-1420: Status filter is not kept after moving to next page
        LIMS-1442: Sample Type is not filtred by Sample Point
        LIMS-1448: Reports: when you click on "Analysis turnaround time" displays others
        LIMS-1440: Error when trying to publish with analysis from different categories
        LIMS-1459: Error when checking instrument validity in manage_results
        LIMS-1430: Create an AR from batch allows you to introduce a non existent Client and Contacts don't work properly
        
        - After modifying analysis Category, reindex category name and UID for all subordinate analyses
        - Setup data import improvements and fixes
        - Simplify installation with a custom Plone overview and add site
        
        
        3.1.5 (2014-10-06)
        ------------------
        
        LIMS-1082: Report Barcode. Was images for pdf/print reports etc
        LIMS-1159: reapply fix for samplepoint visibility
        LIMS-1325: WSTemplate loading incompatible reference analyses
        LIMS-1333: Batch label replace with standard Plone keyword widget
        LIMS-1335: Reference Definitions don't sort alphabetically on WS Template lay-outs
        LIMS-1345: Analysis profiles don't sort
        LIMS-1347: Analysis/AR background colour to be different to for Receive and To be Sampled
        LIMS-1360: Number of analyses in ARs folder view
        LIMS-1374: Auto label printing does not happen for an AR drop-down receive
        LIMS-1377: Error when trying to publish after updating branch hotfix/next or develop
        LIMS-1378: Add AR/Sample default fields to Batch
        LIMS-1395: front page issue tracker url
        LIMS-1402: If no date is chosen, it will never expire." not been accomplished
        LIMS-1416: If a sample point has a default sample type the field is not pulled automatically during AR template creation
        LIMS-1425: Verify Workflow (bika_listing) recursion
        
        - added 'getusers' method to JSON API
        - Added 'remove' method to JSON API
        - Added AR 'Copy to new' action in more contexts
        - Added basic handling of custom Sample Preparation Workflows
        - Added decimal mark configuration for result reports
        - Added help info regards to new templates creation
        - Added IAcquireFieldDefaults - acquire field defaults through acquisition
        - Added IATWidgetVisibility - runtime show/hide of AT edit/view widgets
        - Added watermark on invalid reports
        - Added watermark on provisional reports
        - Alert panel when upgrades are available
        - All relevant specification ranges are persisted when copying ARs or adding analyses
        - Allow comma entry in numbers for e.g. German users
        - Bika LIMS javascripts refactoring and optimization
        - Fix ZeroDivisionError in variation calculation for DuplicateAnalysis
        - Fixed spreadsheet load errors in Windows.
        - Fixed template rendering errors in Windows
        - JSONAPI update: always use field mutator if available
        - JSONAPI: Added 'remove' and 'getusers' methods.
        - Refactored ARSpecs, and added ResultsRange field to the AR
        
        3.1.4.1 (2014-07-24)
        --------------------
        
        3.1.4 release was broken, simple ARs could not be created.
        
        
        
        3.1.4.1 (2014-07-24)
        --------------------
        
        3.1.4 release was broken, simple ARs could not be created.
        
        LIMS-1339: Published reports should use "±" symbol instead of "+/-"
        LIMS-1327: Instrument from worksheet
        LIMS-1328: Instrument calibration test graphs do not work on multiple samples
        LIMS-1347: Analysis/AR background colour to be different to for Receive and To be Sampled
        LIMS-1353: Analyses don't sort in Attachment look-up
        
        Preview for Results reports
            - Single/Multi-AR preview
            - Allows to cancel the pre-publish/publish process
            - Allows to make visible/invisible the QC analyses
            - Allows to add new custom-made templates
            - JS machinery allowed for pdf reporting
        
        3.1.4 (2014-07-23)
        ------------------
        
        LIMS-113: Allow percentage value for AS uncertainty
        LIMS-1087: Prevent listing of empty categories
        LIMS-1203: Fix Batch-AnalysisRequests query
        LIMS-1207: LIMS-113 Allow percentage value for AS uncertainty
        LIMS-1221: use folder icon for ARImports in nav
        LIMS-1240: fix permissions for "Copy To New" in AR lists
        LIMS-1330: handle duplicate of reference analysis
        LIMS-1340: soft-cache validator results
        LIMS-1343: Prevent sudden death if no version information is available
        LIMS-1352: SamplingWorkflow not saved to sample
        LIMS-334: Add Service/ExponentialFormatPrecision
        LIMS-334: Added ExponentialFormatThreshold setting
        LIMS-334: Allow exponential notation entry in numeric fields
        LIMS-334: Exponent Format used for analysis Result
        LIMS-334: Remove duplicate getFormattedResult code
        LIMS-83: Update Method->calculation reference version when Calculation changes
        
        - Formula statements can be written on multiple lines for clarity.
        
        - Replace kss-bbb ajax-spinner with a quieter one
        
        - bika.lims.utils.log logs location url correctly
        
        3.1.3 (2014-07-17)
        ------------------
        
        Missing fixes from 3.1.2
        
        LIMS-671: Preferred/Restricted client categories
        LIMS-1251: Supply order permission error
        LIMS-1272: Currency in Price Lists
        LIMS-1310: Broken AnalysisProfile selector in AR Add form.
        
        3.1.2 (2014-07-15)
        ------------------
        
        LIMS-1292: UI fix Retracted ARs workfow: Warning msg on "full" retract.
        LIMS.1287: UI fix Report parameter formatting
        LIMS-1230: UI fix Livesearch's box
        LIMS-1257: UI fix Long titles in Analysis Profiles, Sample Points, etc.
        LIMS-1214: UI fix More columns
        LIMS-1199: UI fix Worksheet listing: better columns
        LIMS-1303: jsi18n strings must be added to bika-manual.pot.  i18ndude cannot find.
        LIMS-1310: Filter SamplePoints by client in AR Template Edit View
        LIMS-1256: Client objects included in AR-Add filters for Sample Point etc.
        LIMS-1290: Allows Analyst to retract analyses, without giving extra permissions.
        LIMS-1218: Slightly nicer monkey patch for translating content object ID's and titles.
        LIMS-1070: Accreditation text can be customised in bika_setup
        LIMS-1245: off-by-one in part indicators in ar_add
        LIMS-1240: Hide "copy to new" from Analyst users
        
        LIMS-1059: Added worksheet rejection workflow
            RejectAnalysis (Analysis subclass (has IAnalysis!)) workflow transition.
            Does not retract individual Analysis objects - instead, forces their state
                back to "Received", and assigns them onto newly created WS.
            Sets attributes on src and dst worksheets:
                WS instance rejected worksheet attribute: .replaced_by = UID
                WS instance replacement worksheet attribute: .replaces_rejected_worksheet:UID
        
        Fixed some i18n and encoding snags, and updated translations.
        
        3.1.1 (2014-06-29)
        ------------------
        
        Some bugs which only appear while running Windows, have been fixed.
        
        LIMS-1281: Fix Restricted and Default categories in ar_add
        LIMS-1275: Fix lax Aalyst permissions
        LIMS-1301: jsonapi can set ReferenceField=""
        LIMS-1221: Icon for ARImports folder in Navigation
        LIMS-1252: AR Published Results Signature Block formatting
        LIMS-1297: Update frontpage
        
        
        3.1 (2014-06-23)
        ----------------
        
        - Product and Analysis specifications per AR
        - Incorrect published results invalidation workflow
        - Improved re-testing workflow
        - Adjustment factors on worksheets
        - Using '< n' and '> n' results values
        - Sample Storage locations
        - Sample Categories
        - Analysis Prioritisation
        - Bulk AR creation from file
        - Results reports inclusion of relevant QC results
        - Supply Inventory and Orders
        - JSON interface
        - Management Reports export to CSV
        - Enhancements to AR Batching
        - Enhancements to Results Reports
        
        - Instrument management module
        
            Calibration certificates, maintenance, Instrument QC
            Method, Instrument and Analysis integrity
        
        - Instrument interfaces
        
             Agilent MS 'Masshunter Quant'
             Thermo Gallery
             Foss Winescan FT 120, Auto
        
        - Invoices
        
           Per AR, Analysis per Invoice line.
           Per Supply Order, inventory item per Invoice line
           Invoices by email
           Invoice 'batches' for selected time period, ARs aand Orders per Invoice line
           Invoice batch export to accounts systems
           Price lists. Analysis Services and Supplies
        
        3.1.3036 (2014-05-30)
        ---------------------
        
        Added two checboxes in BikaSetup > Security:
        - Allow access to worksheets only to assigned analysts (Y/N)
        - Only lab managers can create and amange new worksheets (Y/N)
        
        ** IMPORTANT NOTES **
        The 3036 upgrade sets the above options to true by default, so after
        being upgraded, only the labmanagers will be able to manage WS and the
        analysts will only have access to the worksheets to which they are
        assigned. These defaults can be changed in BikaSetup > Security.
        
        3.0 (2014-03-15)
        ----------------
        
        - Fix some out-dated dependencies that prevented the app from loading.
        
        - Development of the current bika 3.0 code has slowed, and our efforts have been focused on
        the 3.01a branch for some time.
        
        3.0rc3.5.1 (2013-10-25)
        -----------------------
        
        Fix CSS AR Publication error
        
        3.0rc3.5.1 (2013-10-25)
        -----------------------
        
        Fix error displaying client sample views
        
        3.0rc3.5 (2013-10-24)
        ---------------------
        
        Requires Plone 4.3.  For information on upgrading Plone, visit
        http://plone.org/documentation/manual/upgrade-guide
        
        - Fix a serious error saving Analysis results.
        - Improve upgrade handling in genericsetup profile
        - Fix errors in setupdata loader
        - Force UTF-8 encoding of usernames (imported client contacts can now login)
        - Removed outdated test setup data
        - Handle duplicate request values in bika_listing
        - ID server handles changes in ID schemes without error
        - Remove folder-full-view from front-page view
        - Updated workflow and permissions to prevent some silly errors
        - Add robot tests
        - Add default robots.txt
        
        3.0rc3.2 (2013-06-28)
        ---------------------
        
        - Fix site-error displaying upgraded instruments
        - Fix spinner (KSS is not always enabled)
        - Add extra save button in ar_add
        - Label Printing: "Return to list" uses browser history
        - Bold worksheet position indicators
        - Remove version.txt (use only setup.py for version)
        
        3.0rc3.1 (2013-06-27)
        ---------------------
        
        - Fix permission name in upgrade step
        
        3.0rc3 (2013-06-25)
        -------------------
        
        - Many instrument management improvements! (Merge branch 'imm')
        - Removed ReferenceManufacturer (use of generic Manufacturer instead)
        - Removed ReferenceSupplier (use Supplier instead)
        - Improve service/calculation interim field widgets
          Allows service to include custom fields (without calculation selected)
        - Fix services display table categorisation in Analysis Specification views
        - Stop focusing the search gadget input when page load completes. (revert)
        - Limit access to Import tab (BIKA: Manage Bika)
        - New permission: "BIKA: Import Instrument Results"
        - New permission: "BIKA: Manage Login Details" - edit contact login details
        - Some late changes to better handle the updates to ID creation
        - Plone 4.3 compatibility (incomplete)
        - Use Collections as a base for Queries (incomplete)
        - Many many bugfixes.
        
        3.0rc2.3 (2013-01-29)
        -------------------
        
        - Fix bad HTML
        
        3.0rc2.2 (2013-01-28)
        -------------------
        
        - Fix an error during AR Publish
        
        3.0rc2.1 (2013-01-21)
        -------------------
        
        - Fix bad HTML
        - Pin collective.js.jqueryui version to 1.8.16.9
        
        3.0rc2 (2013-01-21)
        -------------------
        
        - Updated all translations and added Brazilian Portuguese
        - RecordsWidget: subfield_types include "date"
        - RecordsWidget: Automatic combogrid lookups
        - Added all bika types to Search and Live Search
        - Transition SamplePartition IDs to new format (SampleType-000?-P?
        - Always handle non-ASCII characters: UTF-8 encoding everywhere
        - Accept un-floatable (text) results for analyses
        - Hidden InterimFields in Calculations
        - Added InterimFields on AnalysisServices for overriding Calculation Interimfields.
        - Disable KSS inline-validation
        - Categorized analyses in AR views
        - Added remarks for individual analyses
        - Improved Javascript i18n handling
        - Improved default permissions
        - New reports
            - Added 'Analysis summary per department' (merge of 'Analyses lab department weekly' and 'Analyses request summary by date range'
            - Added 'Analyses performed as % of total' report
            - Added Analyses per lab department report
            - Added 'Samples received vs. samples reported' report
            - Added Daily Samples Received report
        - Many many bugfixes.
        
        3.0rc1 (2012-10-01)
        -------------------
        
        
        - Removed Bika Health data from released egg
        - Remove remarks from portal_factory screens
        - Add Month/Year selectors to default datetime widget
        - ClientFolder default sorting.
        - Date formats for jquery datepicker
        - Don't overwrite the Title specified in @@plone-addsite
        - Bug fixes
        
        3.0rc1 (2012-09-25)
        -------------------
        
        ### Changes
        
        - Requires Python 2.7 (Plone 4.2)
        - Add GNUPlot dependency
        - Added client sample points
        - Added Sampling Deviation selections
        - Added Ad-Hoc sample flag
        - Added Sample Matrices (Sampletype categorisation)
        - Added custom ResultsFooter field in bika setup
        - Added PDF Attachments to published results
        - Electronic signature included in Results and Reports
        - Login details form to create users for LabContacts
        - Sampling workflow is disabled by default
        - Methods are versioned by default
        - Methods are publicly accessible by default
        - Queries WIP
        - Reports WIP
        - Modified label layouts for easier customisation
        - Cleaned print styles
        - Use plonelocales for handling Date/Time formats
        - SMS and Fax setup items are disabled by default
        
        2012-06-21
        ----------
        
        - Partitioning & Preservation automation
        - Reports
        - Sample point & types relations in UI
        - AR template enhancements
        - Sample and AR layout improvements
        - Labels
        - Configuration logs
        - Faster indexing
        - JavaScript optimisation
        - Better IE compatibility
        - Set-up worksheet improvements
        - Updated translations
        - Workflow tweaks
        - Tweaks to Icons, Views & Lists
        
        2012-04-23
        ----------
        
        - Optional sampling and preservation workflows and roles.
        - Sample partitioning.
        - AR templates - Sample point & Sample type restrictions.
        - Reports - framework only. 'Analysis per service' shows what is planned.
        - Improved i18n handling, and updated strings from Transifex.
        - Numerous performance enhancements
        - Analysis Service & Method associations.
        - An improved Analysis Service pop-up window.
        - Sample Type and Sample Point relationship.
        - Currency selection from zope locales
        - Combined AR View and Edit tabs.
        - Re-factored AR 'Add/Remove Analyses' screen
        - Store the date of capture for analysis results
        - Append only remarks fields on more objects.
        
        2012-01-23
        ----------
        
         - Made Bika compatible with Plone 4.1
         - Sampler and Preserver roles, users and permissions
         - Sampling and Preservation workflows
         - Inactive and Cancellation Workflows
         - Pre-preserved Containers
         - Automatic versioning for some bika_setup types
         - Analyst and Instrument on Worksheet templates
         - XLSX setup data loader
         - Sample disposal date based on date sampled, not date received.
         - Internal ID Server by default
         - user defined calculations and interim fields
         - Dry Matter results option does not appear until enabled in Site Setup
         - Accreditation portlet disabled until enabled in Site Setup
         - BikaListingView
         - New icons
         - (mostly) usable at 800x600
         - Column display toggles
         - Future dated samples and ARs
         - Accreditation template: i18n in locales/manual.pot/accreditation_*
         - intermediate workflow state for analyses requiring attachments
         - Labmanager has Site Administrator role (not Manager)
         - 'Indeterminate' results
         - use portal_factory everywhere
         - working test suite
         - static resource directories
         - Merged BikaMembers types
         - CoordinateField/Widget
         - DurationField/Widget
         - CustomRecordsWidget
        
        2.3.3 Bug fix release
        ---------------------
        
         - Inclusion of BikaMembers 0.0.3. No changes to bika code, version bumped
           to facilitate release of new BikaMembers version.
        
        2.3
        ---
        
         - Analysis categories introduced
         - Analysis service result restrictions - specification of possible results
         - Allow site and client specification of email and fax subject line content
         - Additional instrument/export formats:
           WinescanFT120, WinescanAuto, FIAStar and Bartelt's data-collector
         - Export worksheet analyses to instruments
         - PDF as a result output option
         - SMS result output option
         - Result publication options synchronized and signatures added to emails
         - Email batching of query results conforms to result mailing
         - IDServer batching of unique id request
         - Optmization of worksheet searching on selection criteria
         - Extract tab added with extract for analysis services or profiles
         - Batch update of analysis service prices
         - German translation module added
         - Added a light query form which excludes analysis category and service
         - Batch size setting in analysis request lists
         - BikaMembers replaces UpfrontContacts
         - ATSchemaEditor removed
         - Significant performance improvements
        
         - Resolve client action conflicts
         - Sampled date validation
         - Drymatter formatting on output corrected
         - Correct default none workflows
         - Review portlet optimization
         - Pricelist prints blank for analysis service with price not defined
        
        2.2
        ---
        
         - Attachments permitted on analysis requests and analyses
         - Worksheet resequencing, and sort order for worksheet analysis selection
         - Worksheet deletion only available for open worksheets
         - Portlet to provide export of analysis services and analysis profiles
         - Requirement for unique analysis service names, analysis service keywords,
         - instrument import keywords and analysis profile keywords enforced.
         - Report headings and formats standardized accross different reports
         - AR import alternative layout provided with selection, including profiles
         - Progress bar introduced for long running processes
        
        2.1.1
        -----
        
         - Disposal Date for Samples and Retention Period per Sample Type added.
         - Various new search criteria added.
         - Standard Manufacturers introduced.
         - Labels for Standard Samples introduced.
         - "Print" and "Email" facilities introduced for lists of Standard Samples and Standard Stocks.
         - "Duplicate" facility for Analysis Services introduced.
         - Addresses added to top of emailed query results.
         - Labels for Samples and Analysis Requests changed.
         - Analysis Services can have multiple Methods.
         - Change log introduced for Methods.
         - Methods added to left navigation bar.
         - List of Methods included in pop-up for Analyses.
         - Documents may be uploaded for Methods.
        
        2.1
        ---
        
         - Sample object and workflow introduced
         - Results specifications, lab and per client
         - Analysis profiles
         - Worksheet template engine
         - Interface to Bika Calendar
         - Import of analysisrequests from csv file
         -  Export of results to csv file
         - Print as publication option
         - Lab Departments, lab contacts, and department manager introduced
         - Quality Control calculations. Control, blank and duplicate analyses.
         - QC graphs, normal distribution, trends and duplicate variation
         - Various analysis calculations allowed. Described by Calculation Type
         - Dependant Calcs introduced. Where an analysis result is calculated from
         -  other analyses: e.g. AnalysisX = AnalysisY - Analysis Z
         - Dry matter result reporting. Results are reported on sample as received,
         -  and also as dry matter result on dried sample
         - Re-publication, Pre publication of individual results and per Client
         - Many reports including Turn around, analyses repeated and out of spec
        
        1.2.1
        -----
        
        
         - Removed invoice line item descriptions from core code to allow skin
           integration
         - Create dummy titration values for analyses imported from instrument
         - More language translations
        
        1.2.0
        -----
        
         - Statements renamed to Invoices
         - Jobcards renamed to Worksheets
         - New identification fields added to analysis request
         - Client Reference, Sample Type and Sample Point
         - Welcome page introduced
         - Late analyses list linked from late analyses portlet
         - Icon changes
         - Accreditation body logo and details added to laboratory info
         - Accreditation logo, disclaimers added throughout web site
         - Laboratory confidence level value data driven from laboratory info
         - Analyses methods provided as pop-up where analyses are listed
         - Titration factors and titration volumes added to analyses and worksheets
         - Measure of uncertainties introduced per analysis and intercept
         - Two new specialist roles created - verifier and publisher
         - Sample test data load script - load_sample_data.py
         - Implement generic instrument data import tool
         - Login portlet added
         - Modifications required to support interlab
           Permit analysis parent (sample) to be in 'released' state.
           Reference SampleID on AnalysisRequest-
        
         - 1566324: Logged in page redirected to welcome page.
         - 1573299: LiveSearch - Added permissions to InvoiceLineItem.
         - 1573083: Status Drop Down - Invoicing
         - 1551957: Contacts not visible to other contacts. Correct local owner role
         - 1566334: position of 'add new ar' button changed to conform to other forms
         - 1532008: query results sort order most recent first
         - 1532770: Order default listing correction
         - 1558458: Member discount data driven in messages on AR forms
         - 1538354: SubTotal and VAT calculation on edit AR
         - 1532796: AR edit - allow change of contact
        
        1.1.3
        -----
        
         This is a bug fix release. Migration from older versions has also
         been improved greatly.
        
         Please note that AnalysisRequest now has a custom mutator that
         expects the title of the Cultivar, not the UID. This will impact
         anybode that customised the *analysisrequed_add.cpy* controller
         script and the *validate_analysisrequest_add_form.vpy* validation
         script.
        
        
         - 1423182: IndexError on surfing to LIMS pages without being logged on
         - 1423238: Orders - Dispatch date
         - 1429992: AR edit tab - Cultivar uneditable
         - 1429996: Cultivar names to allow numbers
         - 1429999: Late analysis alert - 'More...' URL
         - 1430002: Sample due alerts - 'More...' URL
         - 1433787: Security - Clients
         - 1434100: Search - Index & Attribute errors
         - 1418473: Updated start-id-server.bat for Win2K & Win XP
        
        1.1.2
        -----
        
         - 1423205: Show logs to labmanager set-up
         - 1291750: Added default ID prefixes for Order and Statement
         - 1424589: Late analysis alert to be calulated on date received
        
        1.1.1
        -----
        
        
         - Updated portlets with Plone 2.1 style definition list markup
        
         - 1423179: Clients must not see JobCard links on Analysis Requests
         - 1423182: IndexError on surfing to LIMS pages without being logged on
         - 1423188: Site map - Clients should not have access to ...
         - 1423191: Link rot - 'logged in' page
         - 1423193: Groups folder should not be shown
         - 1423194: No 'More...' if there are less than 5
         - 1423204: AR view - Missing tabs and status drop down
         - 1423209: Schema Editor - Drop Down List Issue (Select)
         - 1423234: Late Analysis alert shows for anonymous visitors
         - 1423363: Report Analysis Totals
         - 1423386: Email publication error
        
        1.1.0
        -----
        
         - Made Bika compatibable with Plone 2.1
         - Added Spanish translation contributed by Luis Espinoza
         - Added Italian translation contributed by Pierpaolo Baldan
         - Added Dutch translation contributed by Joris Goudriaan
         - Added Portugese translation contributed by Nuno R. Pinhão
         - The schemas of Client, Contact, AnalysisRequest and Order can be
           edited in the through-the-web schema editor, ATSchemaEditorNG.
         - The maximum time allowed for the publication of results can now be
           set per analysis service. The portlet
           'skins/bika/portlet_late_analysis.pt' has been added to alert lab
           users when analyses are late.
         - Analyses on an AnalysisRequest have a reference to a Jobcard,
           rendered as a hyperlink on the AnalysisRequest view.
         - A bug has been fixed where 'not_requested' analyses were checked
           on the AnalysisRequest edit form.
         - Enabled 'changed_state' folder button globally and disabled on
           AnalysisRequest and Jobcard.
        
        1.0.1
        -----
        
         - Updated 'skins/bika/date_components_support.py' with latest
           version of script in Plone 2.0.5
         - Modified access to transitions in workflow scripts, normal
           attribute access seems to guarded since Zope 2.7.5.
         - Added CHANGES.txt and README.txt
         - Added windows batch script for ID server
           (scripts/start-id-server.bat)
        
        
        Authors and maintainers
        -----------------------
        - Bika Lab Systems, http://bikalabs.com
        - Naralabs, http://naralabs.com
Keywords: lims,bika,opensource
Platform: UNKNOWN
Classifier: Framework :: Plone
Classifier: Programming Language :: Python
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Web Environment
Classifier: Intended Audience :: Information Technology
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)
