Metadata-Version: 2.1
Name: calour
Version: 2019.5.1
Summary: CALOUR: exploratory and interactive microbiome analyses based on heatmap
Home-page: http://biocore.github.io/calour
Author: calour development team
Author-email: zhenjiang.xu@gmail.com
Maintainer: calour development team
License: BSD
Keywords: microbiome heatmap analysis bioinformatics
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: License :: OSI Approved :: BSD License
Classifier: Environment :: Console
Classifier: Topic :: Software Development :: Libraries :: Application Frameworks
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Operating System :: Unix
Classifier: Operating System :: POSIX
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
License-File: COPYING.txt
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: pandas
Requires-Dist: matplotlib (>=2.0)
Requires-Dist: scikit-learn (>=0.19.1)
Requires-Dist: biom-format
Requires-Dist: statsmodels
Requires-Dist: docrep
Provides-Extra: coverage
Requires-Dist: coveralls ; extra == 'coverage'
Provides-Extra: dendrogram
Requires-Dist: scikit-bio (>=0.5.1) ; extra == 'dendrogram'
Provides-Extra: doc
Requires-Dist: Sphinx (>=1.4) ; extra == 'doc'
Requires-Dist: sphinx-autodoc-typehints ; extra == 'doc'
Requires-Dist: nbsphinx ; extra == 'doc'
Provides-Extra: test
Requires-Dist: nose ; extra == 'test'
Requires-Dist: pep8 ; extra == 'test'
Requires-Dist: flake8 ; extra == 'test'
Requires-Dist: scikit-bio (>=0.5.1) ; extra == 'test'
Requires-Dist: ipywidgets ; extra == 'test'

CALOUR
======
[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/biocore/calour/master?filepath=doc%2Fsource%2Fnotebooks)
[![Build Status](https://travis-ci.org/biocore/calour.png?branch=master)](https://travis-ci.org/biocore/calour)
[![Coverage Status](https://coveralls.io/repos/github/biocore/calour/badge.svg?branch=master)](https://coveralls.io/github/biocore/calour?branch=master)

exploratory and interactive microbiome analysis based on heatmaps


[Installation](https://github.com/biocore/calour/blob/master/INSTALL.md)
========================================================================


[Documentation](http://biocore.github.io/calour)
================================================


[Mouse & Keyboard Operation](http://biocore.github.io/calour/generated/calour.heatmap.plot.html#calour.heatmap.plot)
====================================================================================================================


[Change History](https://github.com/biocore/calour/blob/master/CHANGELOG.md)
============================================================================


[How to Contribute](https://github.com/biocore/calour/blob/master/CONTRIBUTING.md)
==================================================================================


Please Cite
===========
[Xu ZZ, Amir A, Sanders J, Zhu Q, Morton JT, Bletz MC, Tripathi A, Huang S, McDonald D, Jiang L, et al. (2019) Calour: an Interactive, Microbe-Centric Analysis Tool. mSystems, 4, e00269-18.](https://msystems.asm.org/content/4/1/e00269-18)
