CHANGELOG.rst
LICENSE
MANIFEST.in
README.rst
setup.py
tox.ini
MAmotif.egg-info/PKG-INFO
MAmotif.egg-info/SOURCES.txt
MAmotif.egg-info/dependency_links.txt
MAmotif.egg-info/entry_points.txt
MAmotif.egg-info/not-zip-safe
MAmotif.egg-info/requires.txt
MAmotif.egg-info/top_level.txt
docs/Makefile
docs/make.bat
docs/source/changelog.rst
docs/source/conf.py
docs/source/contact.rst
docs/source/demo.rst
docs/source/faq.rst
docs/source/index.rst
docs/source/intro.rst
docs/source/license.rst
docs/source/tutorial.rst
docs/source/image/MAmotif_workflow.png
mamotif/__init__.py
mamotif/integration.py
mamotif/io.py
mamotif/logging.py
mamotif/region.py
mamotif/stats.py
mamotif/cli/__init__.py
mamotif/cli/intergrate.py
mamotif/cli/main.py
mamotif/cli/run.py
tests/conftest.py
tests/test_cli.py
tests/data/H1hescH3k4me3Rep1_peaks.xls
tests/data/H1hescH3k4me3Rep1_reads.bed
tests/data/K562H3k4me3Rep1_peaks.xls
tests/data/K562H3k4me3Rep1_reads.bed