Metadata-Version: 2.1
Name: SpliceV
Version: 0.1.3
Summary: Visualize splice junctions, backsplice junctions (circleRNA) and coverage from RNA-Seq datasets
Home-page: https://github.com/flemingtonlab/SpliceV
Author: Nathan Ungerleider
Author-email: nungerle@tulane.edu
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Requires-Python: >=2.7,>=3
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: pysam
Requires-Dist: pkg-resources

# SpliceV #
Visualize coverage, canonical, and backsplice junctions.

![Example plot](https://github.com/flemingtonlab/SpliceV/blob/master/etc/example.png)

## Requirements ##
SpliceV works with Python 2.7 and 3.0+.
## Dependencies ##
* Matplotlib
* Numpy
* pysam
## Installation ##
To install SpliceV:

```
pip install SpliceV
```

Or:

```
git clone https://github.com/flemingtonlab/SpliceV.git
```

## Example ##
To run the example dataset:

```
git clone https://github.com/flemingtonlab/SpliceV.git 

cd SpliceV/example 

python ../bin/SpliceV -b example.bam -gtf uba2.gtf -g UBA2 -f 5

```

## Authors ##
Created by Nathan Ungerleider and Erik Flemington


