Metadata-Version: 1.2
Name: bio2bel_go
Version: 0.0.1
Summary: A package for converting GO to BEL
Home-page: https://github.com/bio2bel/go
Author: Charles Tapley Hoyt
Author-email: charles.hoyt@scai.fraunhofer.de
Maintainer: Charles Tapley Hoyt
Maintainer-email: charles.hoyt@scai.fraunhofer.de
License: MIT License
Description: Bio2BEL GO |build| |coverage| |documentation|
        =============================================
        Converts the Gene Ontology (GO) to BEL
        
        Installation |pypi_version| |python_versions| |pypi_license|
        ------------------------------------------------------------
        ``bio2bel_go`` can be installed easily from `PyPI <https://pypi.python.org/pypi/bio2bel_go>`_ with
        the following code in your favorite terminal:
        
        .. code-block:: sh
        
            $ python3 -m pip install bio2bel_go
        
        or from the latest code on `GitHub <https://github.com/bio2bel/go>`_ with:
        
        .. code-block:: sh
        
            $ python3 -m pip install git+https://github.com/bio2bel/go.git@master
        
        Setup
        -----
        GO can be downloaded and populated from either the Python REPL or the automatically installed command line
        utility.
        
        Python REPL
        ~~~~~~~~~~~
        .. code-block:: python
        
            >>> import bio2bel_go
            >>> go_manager = bio2bel_go.Manager()
            >>> go_manager.populate()
        
        Command Line Utility
        ~~~~~~~~~~~~~~~~~~~~
        .. code-block:: bash
        
            bio2bel_go populate
        
        Citation
        --------
        - Ashburner, M., *et al.* (2000). `Gene ontology: tool for the unification of biology <https://doi.org/10.1038/75556>`_.
          The Gene Ontology Consortium. Nature Genetics, 25(1), 25–9.
        
        Links
        -----
        - http://geneontology.org/page/ontology-documentation
        
        .. |build| image:: https://travis-ci.org/bio2bel/go.svg?branch=master
            :target: https://travis-ci.org/bio2bel/go
            :alt: Build Status
        
        .. |documentation| image:: http://readthedocs.org/projects/bio2bel-go/badge/?version=latest
            :target: http://bio2bel.readthedocs.io/projects/go/en/latest/?badge=latest
            :alt: Documentation Status
        
        .. |pypi_version| image:: https://img.shields.io/pypi/v/bio2bel_go.svg
            :alt: Current version on PyPI
        
        .. |coverage| image:: https://codecov.io/gh/bio2bel/go/coverage.svg?branch=master
            :target: https://codecov.io/gh/bio2bel/go?branch=master
            :alt: Coverage Status
        
        .. |climate| image:: https://codeclimate.com/github/bio2bel/go/badges/gpa.svg
            :target: https://codeclimate.com/github/bio2bel/go
            :alt: Code Climate
        
        .. |python_versions| image:: https://img.shields.io/pypi/pyversions/bio2bel_go.svg
            :alt: Stable Supported Python Versions
        
        .. |pypi_license| image:: https://img.shields.io/pypi/l/bio2bel_go.svg
            :alt: MIT License
        
Keywords: Biological Expression Language,BEL,Systems Biology,Networks Biology,Gene Ontology
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
