Metadata-Version: 2.1
Name: CIRIquant
Version: 1.1.2
Summary: circular RNA quantification pipeline
Home-page: https://github.com/bioinfo-biols/CIRIquant
Author: Jinyang Zhang
Author-email: zhangjinyang@biols.ac.cn
Maintainer: Jinyang Zhang
Maintainer-email: zhangjinyang@biols.ac.cn
License: MIT
Description: ## CIRIquant ##
        
        [![Build Status](https://staging.travis-ci.com/bioinfo-biols/CIRIquant.svg?branch=master)](https://staging.travis-ci.com/bioinfo-biols/CIRIquant)
        ![GitHub release (latest by date)](https://img.shields.io/github/v/release/bioinfo-biols/CIRIquant)
        [![The MIT License](https://img.shields.io/badge/license-MIT-orange.svg)](https://github.com/bioinfo-biols/CIRIquant/blob/master/LICENSE)
        ![GitHub All Releases](https://img.shields.io/github/downloads/bioinfo-biols/CIRIquant/total)
        ![SourceForge](https://img.shields.io/sourceforge/dm/ciri/CIRIquant)
        ![Readthedoc](https://readthedocs.org/projects/ciriquant-cookbook/badge/?version=latest)
        
        CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantification in RNA-Seq data
        
        ### Documentation ### 
        
        Documentation is available online at [https://ciriquant-cookbook.readthedocs.io/en/latest/index.html](https://ciriquant-cookbook.readthedocs.io/en/latest/index.html)
        
        ### Author ###
        
        Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)
        
        Maintainer: Jinyang Zhang
        
        ### Release Notes ###
        
        - Version 1.1: Added support for stranded library and GFF3 format input.
        - Version 1.0: The first released version of CIRIquant.
        
        ### License ###
        
        The code is released under the MIT License. See the `LICENSE` file for more detail.
        
        ### Citing CIRIquant
        
        - Zhang, J., Chen, S., Yang, J. et al. Accurate quantification of circular RNAs identifies extensive circular isoform switching events. Nat Commun 11, 90 (2020) [doi:10.1038/s41467-019-13840-9](https://doi.org/10.1038/s41467-019-13840-9)
        
Keywords: circRNA
Platform: UNKNOWN
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Intended Audience :: Developers
Classifier: Operating System :: OS Independent
Description-Content-Type: text/markdown
