MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
autofit/__init__.py
autofit/conf.py
autofit/exc.py
autofit/aggregator/__init__.py
autofit/aggregator/aggregator.py
autofit/aggregator/phase_output.py
autofit/aggregator/predicate.py
autofit/expectation_propagation/__init__.py
autofit/expectation_propagation/fascade.py
autofit/expectation_propagation/mean_field.py
autofit/expectation_propagation/optimise.py
autofit/expectation_propagation/sampling.py
autofit/expectation_propagation/utils.py
autofit/expectation_propagation/factor_graphs/__init__.py
autofit/expectation_propagation/factor_graphs/abstract.py
autofit/expectation_propagation/factor_graphs/factor.py
autofit/expectation_propagation/factor_graphs/graph.py
autofit/expectation_propagation/factor_graphs/numerical.py
autofit/expectation_propagation/factor_graphs/variable.py
autofit/expectation_propagation/messages/__init__.py
autofit/expectation_propagation/messages/abstract.py
autofit/expectation_propagation/messages/fixed.py
autofit/expectation_propagation/messages/gamma.py
autofit/expectation_propagation/messages/normal.py
autofit/mapper/__init__.py
autofit/mapper/link.py
autofit/mapper/model.py
autofit/mapper/model_mapper.py
autofit/mapper/model_object.py
autofit/mapper/prior/__init__.py
autofit/mapper/prior/arithmetic.py
autofit/mapper/prior/assertion.py
autofit/mapper/prior/compound.py
autofit/mapper/prior/deferred.py
autofit/mapper/prior/prior.py
autofit/mapper/prior/promise.py
autofit/mapper/prior_model/__init__.py
autofit/mapper/prior_model/abstract.py
autofit/mapper/prior_model/annotation.py
autofit/mapper/prior_model/attribute_pair.py
autofit/mapper/prior_model/collection.py
autofit/mapper/prior_model/dimension_type.py
autofit/mapper/prior_model/prior_model.py
autofit/mapper/prior_model/recursion.py
autofit/mapper/prior_model/util.py
autofit/non_linear/__init__.py
autofit/non_linear/abstract_search.py
autofit/non_linear/grid_search.py
autofit/non_linear/initializer.py
autofit/non_linear/log.py
autofit/non_linear/paths.py
autofit/non_linear/samples.py
autofit/non_linear/timer.py
autofit/non_linear/mcmc/__init__.py
autofit/non_linear/mcmc/abstract_mcmc.py
autofit/non_linear/mcmc/emcee.py
autofit/non_linear/mock/__init__.py
autofit/non_linear/mock/mock_search.py
autofit/non_linear/nest/__init__.py
autofit/non_linear/nest/abstract_nest.py
autofit/non_linear/nest/dynesty.py
autofit/non_linear/nest/multi_nest.py
autofit/non_linear/optimize/__init__.py
autofit/non_linear/optimize/abstract_optimize.py
autofit/non_linear/optimize/downhill_simplex.py
autofit/non_linear/optimize/pyswarms.py
autofit/text/__init__.py
autofit/text/formatter.py
autofit/text/model_text.py
autofit/text/samples_text.py
autofit/tools/__init__.py
autofit/tools/edenise.py
autofit/tools/phase.py
autofit/tools/phase_property.py
autofit/tools/pipeline.py
autofit/tools/util.py
howtofit/__init__.py
howtofit/chapter_1_introduction/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/tutorial_4_source_code.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/dataset/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/dataset/dataset.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/fit/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/fit/fit.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/model/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/model/gaussian.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/phase/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/phase/analysis.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/phase/phase.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/phase/result.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/plot/__init__.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/plot/dataset_plots.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/plot/fit_plots.py
howtofit/chapter_1_introduction/tutorial_4_source_code/src/plot/line_plots.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/tutorial_5_visualization_masking.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/dataset/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/dataset/dataset.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/fit/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/fit/fit.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/model/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/model/gaussian.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/phase/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/phase/analysis.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/phase/phase.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/phase/result.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/phase/visualizer.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/plot/__init__.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/plot/dataset_plots.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/plot/fit_plots.py
howtofit/chapter_1_introduction/tutorial_5_visualization_masking/src/plot/line_plots.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/tutorial_6_complex_models.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/dataset/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/dataset/dataset.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/fit/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/fit/fit.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/model/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/model/profiles.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/phase/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/phase/analysis.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/phase/phase.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/phase/result.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/phase/visualizer.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/plot/__init__.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/plot/dataset_plots.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/plot/fit_plots.py
howtofit/chapter_1_introduction/tutorial_6_complex_models/src/plot/line_plots.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/tutorial_7_phase_customization.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/dataset/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/dataset/dataset.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/fit/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/fit/fit.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/model/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/model/profiles.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/analysis.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/phase.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/result.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/settings.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/phase/visualizer.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/plot/__init__.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/plot/dataset_plots.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/plot/fit_plots.py
howtofit/chapter_1_introduction/tutorial_7_phase_customization/src/plot/line_plots.py
howtofit/chapter_2_results/__init__.py
howtofit/chapter_2_results/src/__init__.py
howtofit/chapter_2_results/src/dataset/__init__.py
howtofit/chapter_2_results/src/dataset/dataset.py
howtofit/chapter_2_results/src/fit/__init__.py
howtofit/chapter_2_results/src/fit/fit.py
howtofit/chapter_2_results/src/model/__init__.py
howtofit/chapter_2_results/src/model/profiles.py
howtofit/chapter_2_results/src/phase/__init__.py
howtofit/chapter_2_results/src/phase/aggregator.py
howtofit/chapter_2_results/src/phase/analysis.py
howtofit/chapter_2_results/src/phase/phase.py
howtofit/chapter_2_results/src/phase/result.py
howtofit/chapter_2_results/src/phase/settings.py
howtofit/chapter_2_results/src/phase/visualizer.py
howtofit/chapter_2_results/src/plot/__init__.py
howtofit/chapter_2_results/src/plot/dataset_plots.py
howtofit/chapter_2_results/src/plot/fit_plots.py
howtofit/chapter_2_results/src/plot/line_plots.py
howtofit/simulators/__init__.py
howtofit/simulators/chapter_1/__init__.py
howtofit/simulators/chapter_1/gaussian_x1.py
howtofit/simulators/chapter_1/gaussian_x1_exponential_x1.py
howtofit/simulators/chapter_1/gaussian_x2_exponential_x1.py
howtofit/simulators/chapter_1/gaussian_x3.py
howtofit/simulators/chapter_1/profiles.py
test_autofit/__init__.py
test_autofit/conftest.py
test_autofit/mock.py
test_autofit/mock_real.py
test_autofit/integration/__init__.py
test_autofit/integration/simulator.py
test_autofit/unit/__init__.py
test_autofit/unit/test_aggregator.py
test_autofit/unit/test_equality.py
test_autofit/unit/expectation_propagation/__init__.py
test_autofit/unit/expectation_propagation/conftest.py
test_autofit/unit/expectation_propagation/test_expectation_propagation.py
test_autofit/unit/expectation_propagation/test_factor_graph.py
test_autofit/unit/expectation_propagation/test_lotka_volterra.py
test_autofit/unit/expectation_propagation/test_projection.py
test_autofit/unit/expectation_propagation/test_scratch.py
test_autofit/unit/expectation_propagation/gaussian/__init__.py
test_autofit/unit/expectation_propagation/gaussian/model.py
test_autofit/unit/expectation_propagation/gaussian/test_multiple.py
test_autofit/unit/expectation_propagation/gaussian/test_single.py
test_autofit/unit/expectation_propagation/gaussian/test_syntax.py
test_autofit/unit/expectation_propagation/regression/__init__.py
test_autofit/unit/expectation_propagation/regression/conftest.py
test_autofit/unit/expectation_propagation/regression/test_linear_regression.py
test_autofit/unit/expectation_propagation/regression/test_logistic_regression.py
test_autofit/unit/mapper/__init__.py
test_autofit/unit/mapper/test_abstract.py
test_autofit/unit/mapper/test_arithmetic.py
test_autofit/unit/mapper/test_assertion.py
test_autofit/unit/mapper/test_from_data_names.py
test_autofit/unit/mapper/test_prior.py
test_autofit/unit/mapper/test_prior_parsing.py
test_autofit/unit/mapper/test_recursion.py
test_autofit/unit/mapper/model/__init__.py
test_autofit/unit/mapper/model/test_deference.py
test_autofit/unit/mapper/model/test_link.py
test_autofit/unit/mapper/model/test_model_instance.py
test_autofit/unit/mapper/model/test_model_mapper.py
test_autofit/unit/mapper/model/test_overloading.py
test_autofit/unit/mapper/model/test_prior_model.py
test_autofit/unit/mapper/promise/__init__.py
test_autofit/unit/mapper/promise/test_iteration.py
test_autofit/unit/mapper/promise/test_promise.py
test_autofit/unit/mapper/promise/test_with_type.py
test_autofit/unit/tools/__init__.py
test_autofit/unit/tools/test_dataset.py
test_autofit/unit/tools/test_edenise.py
test_autofit/unit/tools/test_metadata.py
test_autofit/unit/tools/test_path_util.py
test_autofit/unit/tools/test_paths.py
test_autofit/unit/tools/test_phase.py
test_autofit/unit/tools/test_phase_property.py
test_autofit/unit/tools/test_pipeline.py
test_autofit/unit/tools/test_pipeline_composition.py