Metadata-Version: 2.1
Name: DoubleHelix
Version: 1.0.0a5
Summary: Genomic data manipulation tool
Author-email: Multiple <unavailable@doublehelix.bio>
License: MIT License
        
        Copyright (c) 2024 chaplin89
        
        Permission is hereby granted, free of charge, to any person obtaining a copy
        of this software and associated documentation files (the "Software"), to deal
        in the Software without restriction, including without limitation the rights
        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
        copies of the Software, and to permit persons to whom the Software is
        furnished to do so, subject to the following conditions:
        
        The above copyright notice and this permission notice shall be included in all
        copies or substantial portions of the Software.
        
        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
        SOFTWARE.
        
Project-URL: homepage, https://github.com/DoubleHelixApp/DoubleHelix
Project-URL: Documentation, https://helix.readthedocs.io/en/latest/
Project-URL: Repository, https://github.com/DoubleHelixApp/DoubleHelix
Project-URL: Issues, https://github.com/DoubleHelixApp/DoubleHelix/issues
Project-URL: Changelog, https://github.com/DoubleHelix/DoubleHelix/releases
Keywords: bioinformatics,genetics,wgs,microarray,science
Classifier: Development Status :: 3 - Alpha
Classifier: Environment :: Console
Classifier: Environment :: X11 Applications :: Qt
Classifier: Environment :: Win32 (MS Windows)
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: setuptools
Requires-Dist: pefile
Requires-Dist: pycurl
Requires-Dist: tqdm
Requires-Dist: google-cloud-storage
Requires-Dist: sphinx
Requires-Dist: pytest
Requires-Dist: pyinstaller
Requires-Dist: PySide6
Requires-Dist: jinja2
Requires-Dist: vcf_parser
Requires-Dist: doublehelix-external==v0.0.2; platform_system == "Windows"
Requires-Dist: pypiwin32; platform_system == "Windows"
Requires-Dist: sentry-sdk
Requires-Dist: debugpy
Requires-Dist: psutil
Requires-Dist: pydantic

<p align="center">
  <img src="https://avatars.githubusercontent.com/u/168782993?s=200&v=4">
</p>
  <h1 align="center">DoubleHelix</h1>

[![Build + Lint](https://github.com/DoubleHelixApp/DoubleHelix/actions/workflows/python-build-lint.yml/badge.svg)](https://github.com/Helix/Helix/actions/workflows/python-build-lint.yml)
[![Python Publish](https://github.com/DoubleHelixApp/DoubleHelix/actions/workflows/python-publish.yml/badge.svg)](https://github.com/Helix/Helix/actions/workflows/python-publish.yml/badge.svg)

[![PyInstaller release for Linux](https://github.com/DoubleHelixApp/DoubleHelix/actions/workflows/python-pyinstaller-linux.yml/badge.svg)](https://github.com/Helix/Helix/actions/workflows/python-pyinstaller-linux.yml)
[![PyInstaller release for Windows](https://github.com/DoubleHelixApp/DoubleHelix/actions/workflows/python-pyinstaller-win.yml/badge.svg)](https://github.com/Helix/Helix/actions/workflows/python-pyinstaller-win.yml)

DoubleHelix is a tool to manipulate genomic data made for laymen. Still under heavy development. Don't expect anything working.

- [PyPi Package](https://pypi.org/project/doublehelix/)
- [Documentation](https://doublehelix.app/)
- [Telegram Channel](https://t.me/DoubleHelixApp) (administered by [DoubleHelix's own Telegram bot](https://github.com/DoubleHelixApp/TelegramBOT))

### Install
The only currently supported way to install `DoubleHelix` is with a pypi package.

```bash
sudo apt install libqt6waylandclient6 samtools tabix bcftools -y # Only for Linux
python -m pip install doublehelix
helix
```

_NOTE_: See the [doc](https://doublehelix.app/) for more details.
