.codecov.yml
.coveragerc
.dockerignore
.gitignore
.mailmap
.pep8speaks.yml
.readthedocs.yaml
CHANGES.rst
CITATION.cff
CODE_OF_CONDUCT.md
CONTRIBUTING.rst
Dockerfile
LICENSE
README.md
env.yml
pyproject.toml
tox.ini
.circleci/config.yml
.github/dependabot.yml
.github/workflows/tox.yml
docker/files/freesurfer7.3.2-exclude.txt
docker/files/fs-cert.pem
docs/.gitignore
docs/Makefile
docs/api.rst
docs/changes.rst
docs/conf.py
docs/contributing.rst
docs/examples.rst
docs/index.rst
docs/installation.rst
docs/links.rst
docs/requirements.txt
docs/_api/base.rst
docs/_api/interp.rst
docs/_api/io.rst
docs/_api/linear.rst
docs/_api/manip.rst
docs/_api/nonlinear.rst
docs/_api/patched.rst
docs/_api/surface.rst
docs/_static/figure1-joss.pdf
docs/_static/figure1-joss.png
docs/_static/figure1-joss.svg
docs/_static/nitransforms-step1.png
docs/_static/nitransforms-step1.svg
docs/_static/nitransforms-step2.png
docs/_static/nitransforms-step2.svg
docs/_static/nitransforms-step3.png
docs/_static/nitransforms-step3.svg
docs/notebooks/Reading and Writing transforms.ipynb
docs/notebooks/isbi2020.ipynb
joss/nt.bib
joss/paper.md
nitransforms/__init__.py
nitransforms/_version.py
nitransforms/base.py
nitransforms/cli.py
nitransforms/conftest.py
nitransforms/linear.py
nitransforms/manip.py
nitransforms/nonlinear.py
nitransforms/patched.py
nitransforms/resampling.py
nitransforms/surface.py
nitransforms.egg-info/PKG-INFO
nitransforms.egg-info/SOURCES.txt
nitransforms.egg-info/dependency_links.txt
nitransforms.egg-info/entry_points.txt
nitransforms.egg-info/requires.txt
nitransforms.egg-info/top_level.txt
nitransforms/interp/__init__.py
nitransforms/interp/bspline.py
nitransforms/io/__init__.py
nitransforms/io/afni.py
nitransforms/io/base.py
nitransforms/io/fsl.py
nitransforms/io/itk.py
nitransforms/io/lta.py
nitransforms/io/x5.py
nitransforms/tests/__init__.py
nitransforms/tests/test_base.py
nitransforms/tests/test_cli.py
nitransforms/tests/test_conversions.py
nitransforms/tests/test_io.py
nitransforms/tests/test_linear.py
nitransforms/tests/test_manip.py
nitransforms/tests/test_nonlinear.py
nitransforms/tests/test_resampling.py
nitransforms/tests/test_surface.py
nitransforms/tests/test_version.py
nitransforms/tests/test_x5.py
nitransforms/tests/utils.py
nitransforms/tests/data/affine-LAS.afni
nitransforms/tests/data/affine-LAS.afni-array
nitransforms/tests/data/affine-LAS.fs.lta
nitransforms/tests/data/affine-LAS.fsl
nitransforms/tests/data/affine-LAS.itk.tfm
nitransforms/tests/data/affine-LPS.afni
nitransforms/tests/data/affine-LPS.afni-array
nitransforms/tests/data/affine-LPS.fs.lta
nitransforms/tests/data/affine-LPS.fsl
nitransforms/tests/data/affine-LPS.itk.tfm
nitransforms/tests/data/affine-RAS.afni
nitransforms/tests/data/affine-RAS.afni-array
nitransforms/tests/data/affine-RAS.fs.lta
nitransforms/tests/data/affine-RAS.fs.v2v.lta
nitransforms/tests/data/affine-RAS.fsl
nitransforms/tests/data/affine-RAS.itk.tfm
nitransforms/tests/data/affine-antsComposite.h5
nitransforms/tests/data/affine-oblique.afni
nitransforms/tests/data/affine-oblique.afni-array
nitransforms/tests/data/affine-oblique.fs.lta
nitransforms/tests/data/affine-oblique.fsl
nitransforms/tests/data/affine-oblique.itk.tfm
nitransforms/tests/data/bold-to-t1w.lta
nitransforms/tests/data/bold-to-t1w.v2v.lta
nitransforms/tests/data/ds-005_sub-01_from-OASIS_to-T1_warp_fsl.nii.gz
nitransforms/tests/data/hmc-itk.tfm
nitransforms/tests/data/itktflist.tfm
nitransforms/tests/data/itktflist2.tfm
nitransforms/tests/data/regressions/from-fsnative_to-bold_mode-image.fsl
nitransforms/tests/data/regressions/from-fsnative_to-bold_mode-image.lta
nitransforms/tests/data/regressions/from-fsnative_to-bold_mode-image.tfm
nitransforms/tests/data/regressions/from-fsnative_to-bold_mode-image_type-ras2ras.lta
nitransforms/tests/data/regressions/from-fsnative_to-scanner_mode-image.fsl
nitransforms/tests/data/regressions/from-fsnative_to-scanner_mode-image.lta
nitransforms/tests/data/regressions/from-fsnative_to-scanner_mode-image.tfm
nitransforms/tests/data/regressions/from-scanner_to-bold_mode-image.fsl
nitransforms/tests/data/regressions/from-scanner_to-bold_mode-image.lta
nitransforms/tests/data/regressions/from-scanner_to-bold_mode-image.tfm
nitransforms/tests/data/regressions/from-scanner_to-bold_mode-image_type-ras2ras.lta
nitransforms/tests/data/regressions/from-scanner_to-fsnative_mode-image.fsl
nitransforms/tests/data/regressions/from-scanner_to-fsnative_mode-image.lta
nitransforms/tests/data/regressions/from-scanner_to-fsnative_mode-image.tfm