tqdm==4.67.3
hydra-core==1.3.2
omegaconf==2.3.0
tifffile
scipy==1.15.3
pandas==2.3.3
scikit-image==0.25.2
opencv-python
ortools==9.15.6755
imagecodecs==2025.3.30
ete3==3.1.3
scikit-learn==1.7.2
PyQt5==5.15.11
jupyter
matplotlib
