.gitignore
.readthedocs.yml
LICENSE
README.rst
requirements.txt
setup.py
0_CellChatDB/1_human/complex_input_CellChatDB.csv
0_CellChatDB/1_human/interaction_input_CellChatDB.csv
0_CellChatDB/2_mouse/complex_input_CellChatDB.csv
0_CellChatDB/2_mouse/interaction_input_CellChatDB.csv
SpatialDM.egg-info/PKG-INFO
SpatialDM.egg-info/SOURCES.txt
SpatialDM.egg-info/dependency_links.txt
SpatialDM.egg-info/requires.txt
SpatialDM.egg-info/top_level.txt
docs/Makefile
docs/api.rst
docs/conf.py
docs/custom.css
docs/index.rst
docs/install.rst
docs/release.rst
docs/requirements.txt
docs/.figs/AvsB-1.png
docs/.figs/SPP1_CD44.png
docs/.figs/global_plot.png
docs/.figs/runtime_aug16-1.png
docs/autosummary/base.rst
docs/autosummary/class.rst
spatialdm/__init__.py
spatialdm/diff_utils.py
spatialdm/main.py
spatialdm/plottings.py
spatialdm/stats.py
spatialdm/utils.py
spatialdm/version.py
spatialdm/datasets/__init__.py
spatialdm/datasets/_util_dataset.py
spatialdm/datasets/dataset.py
spatialdm/datasets/LR_data/human-complex_input_CellChatDB.csv
spatialdm/datasets/LR_data/human-interaction_input_CellChatDB.csv.gz
spatialdm/datasets/LR_data/mouse-complex_input_CellChatDB.csv
spatialdm/datasets/LR_data/mouse-interaction_input_CellChatDB.csv.gz
spatialdm/datasets/LR_data/zerafish-complex_input_CellChatDB.csv
spatialdm/datasets/LR_data/zerafish-interaction_input_CellChatDB.csv.gz
tutorial/differential_test_intestine.ipynb
tutorial/melanoma.ipynb
tutorial/misc_notes.ipynb
tutorial/simulation/ligand_recptor_pairs_sim.csv
tutorial/simulation/pos.txt
tutorial/simulation/simulation_code.py