LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
atommic/__init__.py
atommic/constants.py
atommic/package_info.py
atommic.egg-info/PKG-INFO
atommic.egg-info/SOURCES.txt
atommic.egg-info/dependency_links.txt
atommic.egg-info/entry_points.txt
atommic.egg-info/not-zip-safe
atommic.egg-info/requires.txt
atommic.egg-info/top_level.txt
atommic/cli/__init__.py
atommic/cli/launch.py
atommic/collections/__init__.py
atommic/collections/common/__init__.py
atommic/collections/common/callbacks/__init__.py
atommic/collections/common/callbacks/callbacks.py
atommic/collections/common/callbacks/ema.py
atommic/collections/common/data/__init__.py
atommic/collections/common/data/mri_loader.py
atommic/collections/common/data/subsample.py
atommic/collections/common/losses/__init__.py
atommic/collections/common/losses/aggregator.py
atommic/collections/common/losses/wasserstein.py
atommic/collections/common/metrics/__init__.py
atommic/collections/common/metrics/global_average_loss_metric.py
atommic/collections/common/nn/__init__.py
atommic/collections/common/nn/base.py
atommic/collections/common/parts/__init__.py
atommic/collections/common/parts/coil_sensitivity_maps.py
atommic/collections/common/parts/fft.py
atommic/collections/common/parts/patch_utils.py
atommic/collections/common/parts/transforms.py
atommic/collections/common/parts/utils.py
atommic/collections/motioncorrection/__init__.py
atommic/collections/motioncorrection/parts/__init__.py
atommic/collections/motioncorrection/parts/motionsimulation.py
atommic/collections/multitask/__init__.py
atommic/collections/multitask/rs/__init__.py
atommic/collections/multitask/rs/data/__init__.py
atommic/collections/multitask/rs/data/mrirs_loader.py
atommic/collections/multitask/rs/nn/__init__.py
atommic/collections/multitask/rs/nn/base.py
atommic/collections/multitask/rs/nn/idslr.py
atommic/collections/multitask/rs/nn/idslr_unet.py
atommic/collections/multitask/rs/nn/mtlrs.py
atommic/collections/multitask/rs/nn/recseg_unet.py
atommic/collections/multitask/rs/nn/segnet.py
atommic/collections/multitask/rs/nn/seranet.py
atommic/collections/multitask/rs/nn/idslr_base/__init__.py
atommic/collections/multitask/rs/nn/idslr_base/idslr_block.py
atommic/collections/multitask/rs/nn/mtlrs_base/__init__.py
atommic/collections/multitask/rs/nn/mtlrs_base/mtlrs_block.py
atommic/collections/multitask/rs/nn/seranet_base/__init__.py
atommic/collections/multitask/rs/nn/seranet_base/convlstm.py
atommic/collections/multitask/rs/nn/seranet_base/convlstm_unet.py
atommic/collections/multitask/rs/nn/seranet_base/seranet_block.py
atommic/collections/multitask/rs/parts/__init__.py
atommic/collections/multitask/rs/parts/transforms.py
atommic/collections/quantitative/__init__.py
atommic/collections/quantitative/data/__init__.py
atommic/collections/quantitative/data/qmri_loader.py
atommic/collections/quantitative/nn/__init__.py
atommic/collections/quantitative/nn/base.py
atommic/collections/quantitative/nn/qcirim.py
atommic/collections/quantitative/nn/qvarnet.py
atommic/collections/quantitative/nn/qzf.py
atommic/collections/quantitative/nn/qrim_base/__init__.py
atommic/collections/quantitative/nn/qrim_base/qrim_block.py
atommic/collections/quantitative/nn/qrim_base/utils.py
atommic/collections/quantitative/nn/qvarnet_base/__init__.py
atommic/collections/quantitative/nn/qvarnet_base/qvarnet_block.py
atommic/collections/quantitative/parts/__init__.py
atommic/collections/quantitative/parts/transforms.py
atommic/collections/reconstruction/__init__.py
atommic/collections/reconstruction/data/__init__.py
atommic/collections/reconstruction/data/mri_reconstruction_loader.py
atommic/collections/reconstruction/losses/__init__.py
atommic/collections/reconstruction/losses/na.py
atommic/collections/reconstruction/losses/ssim.py
atommic/collections/reconstruction/metrics/__init__.py
atommic/collections/reconstruction/metrics/reconstruction_metrics.py
atommic/collections/reconstruction/nn/__init__.py
atommic/collections/reconstruction/nn/base.py
atommic/collections/reconstruction/nn/ccnn.py
atommic/collections/reconstruction/nn/cirim.py
atommic/collections/reconstruction/nn/crnn.py
atommic/collections/reconstruction/nn/dunet.py
atommic/collections/reconstruction/nn/jointicnet.py
atommic/collections/reconstruction/nn/kikinet.py
atommic/collections/reconstruction/nn/lpd.py
atommic/collections/reconstruction/nn/modl.py
atommic/collections/reconstruction/nn/multidomainnet.py
atommic/collections/reconstruction/nn/proximal_gradient.py
atommic/collections/reconstruction/nn/recurrentvarnet.py
atommic/collections/reconstruction/nn/unet.py
atommic/collections/reconstruction/nn/varnet.py
atommic/collections/reconstruction/nn/vsnet.py
atommic/collections/reconstruction/nn/xpdnet.py
atommic/collections/reconstruction/nn/zf.py
atommic/collections/reconstruction/nn/ccnn_base/__init__.py
atommic/collections/reconstruction/nn/ccnn_base/ccnn_block.py
atommic/collections/reconstruction/nn/crnn_base/__init__.py
atommic/collections/reconstruction/nn/crnn_base/crnn_block.py
atommic/collections/reconstruction/nn/crossdomain_base/__init__.py
atommic/collections/reconstruction/nn/crossdomain_base/crossdomain_block.py
atommic/collections/reconstruction/nn/didn_base/__init__.py
atommic/collections/reconstruction/nn/didn_base/didn_block.py
atommic/collections/reconstruction/nn/modl_base/__init__.py
atommic/collections/reconstruction/nn/modl_base/modl_block.py
atommic/collections/reconstruction/nn/multidomainnet_base/__init__.py
atommic/collections/reconstruction/nn/multidomainnet_base/multidomainnet_block.py
atommic/collections/reconstruction/nn/mwcnn_base/__init__.py
atommic/collections/reconstruction/nn/mwcnn_base/mwcnn_block.py
atommic/collections/reconstruction/nn/primaldualnet_base/__init__.py
atommic/collections/reconstruction/nn/primaldualnet_base/primaldualnet_block.py
atommic/collections/reconstruction/nn/recurrentvarnet_base/__init__.py
atommic/collections/reconstruction/nn/recurrentvarnet_base/recurrentvarnet_block.py
atommic/collections/reconstruction/nn/rim_base/__init__.py
atommic/collections/reconstruction/nn/rim_base/conv_layers.py
atommic/collections/reconstruction/nn/rim_base/rim_block.py
atommic/collections/reconstruction/nn/rim_base/rim_utils.py
atommic/collections/reconstruction/nn/rim_base/rnn_cells.py
atommic/collections/reconstruction/nn/sigmanet_base/__init__.py
atommic/collections/reconstruction/nn/sigmanet_base/dc_layers.py
atommic/collections/reconstruction/nn/sigmanet_base/sensitivity_net.py
atommic/collections/reconstruction/nn/unet_base/__init__.py
atommic/collections/reconstruction/nn/unet_base/unet_block.py
atommic/collections/reconstruction/nn/varnet_base/__init__.py
atommic/collections/reconstruction/nn/varnet_base/varnet_block.py
atommic/collections/reconstruction/nn/vsnet_base/__init__.py
atommic/collections/reconstruction/nn/vsnet_base/vsnet_block.py
atommic/collections/reconstruction/parts/__init__.py
atommic/collections/reconstruction/parts/transforms.py
atommic/collections/segmentation/__init__.py
atommic/collections/segmentation/data/__init__.py
atommic/collections/segmentation/data/mri_segmentation_loader.py
atommic/collections/segmentation/losses/__init__.py
atommic/collections/segmentation/losses/cross_entropy.py
atommic/collections/segmentation/losses/dice.py
atommic/collections/segmentation/losses/utils.py
atommic/collections/segmentation/metrics/__init__.py
atommic/collections/segmentation/metrics/segmentation_metrics.py
atommic/collections/segmentation/nn/__init__.py
atommic/collections/segmentation/nn/attentionunet.py
atommic/collections/segmentation/nn/base.py
atommic/collections/segmentation/nn/dynunet.py
atommic/collections/segmentation/nn/lambdaunet.py
atommic/collections/segmentation/nn/segmentationnet.py
atommic/collections/segmentation/nn/unet.py
atommic/collections/segmentation/nn/unet3d.py
atommic/collections/segmentation/nn/unetr.py
atommic/collections/segmentation/nn/vnet.py
atommic/collections/segmentation/nn/attentionunet_base/__init__.py
atommic/collections/segmentation/nn/attentionunet_base/attentionunet_block.py
atommic/collections/segmentation/nn/dynunet_base/__init__.py
atommic/collections/segmentation/nn/dynunet_base/dynunet_block.py
atommic/collections/segmentation/nn/lambdaunet_base/__init__.py
atommic/collections/segmentation/nn/lambdaunet_base/lambdaunet_block.py
atommic/collections/segmentation/nn/unet3d_base/__init__.py
atommic/collections/segmentation/nn/unet3d_base/unet3d_block.py
atommic/collections/segmentation/nn/unetr_base/__init__.py
atommic/collections/segmentation/nn/unetr_base/unetr_block.py
atommic/collections/segmentation/nn/vit_base/__init__.py
atommic/collections/segmentation/nn/vit_base/patchembedding.py
atommic/collections/segmentation/nn/vit_base/transformer_block.py
atommic/collections/segmentation/nn/vit_base/utils.py
atommic/collections/segmentation/nn/vit_base/vit_block.py
atommic/collections/segmentation/nn/vnet_base/__init__.py
atommic/collections/segmentation/nn/vnet_base/vnet_block.py
atommic/collections/segmentation/parts/__init__.py
atommic/collections/segmentation/parts/transforms.py
atommic/core/__init__.py
atommic/core/classes/__init__.py
atommic/core/classes/common.py
atommic/core/classes/dataset.py
atommic/core/classes/export.py
atommic/core/classes/loss.py
atommic/core/classes/modelPT.py
atommic/core/conf/__init__.py
atommic/core/conf/hydra_runner.py
atommic/core/conf/modelPT.py
atommic/core/conf/optimizers.py
atommic/core/conf/schedulers.py
atommic/core/conf/trainer.py
atommic/core/connectors/__init__.py
atommic/core/connectors/save_restore_connector.py
atommic/core/neural_types/__init__.py
atommic/core/neural_types/axes.py
atommic/core/neural_types/comparison.py
atommic/core/neural_types/elements.py
atommic/core/neural_types/neural_type.py
atommic/core/optim/__init__.py
atommic/core/optim/adafactor.py
atommic/core/optim/lion.py
atommic/core/optim/lr_scheduler.py
atommic/core/optim/novograd.py
atommic/core/optim/optimizer_with_main_params.py
atommic/core/optim/optimizers.py
atommic/core/optim/radam.py
atommic/core/utils/__init__.py
atommic/core/utils/neural_type_utils.py
atommic/core/utils/numba_utils.py
atommic/core/utils/process_launcher/__init__.py
atommic/core/utils/process_launcher/launcher.py
atommic/utils/__init__.py
atommic/utils/app_state.py
atommic/utils/atommic_logging.py
atommic/utils/cast_utils.py
atommic/utils/env_var_parsing.py
atommic/utils/exceptions.py
atommic/utils/exp_manager.py
atommic/utils/export_utils.py
atommic/utils/get_rank.py
atommic/utils/lightning_logger_patch.py
atommic/utils/metaclasses.py
atommic/utils/model_utils.py
atommic/utils/timers.py
atommic/utils/callbacks/__init__.py
atommic/utils/callbacks/atommic_model_checkpoint.py
atommic/utils/callbacks/preemption.py
atommic/utils/decorators/__init__.py
atommic/utils/decorators/deprecated.py
atommic/utils/decorators/experimental.py
atommic/utils/decorators/port_docs.py
atommic/utils/formaters/__init__.py
atommic/utils/formaters/base.py
atommic/utils/formaters/colors.py
atommic/utils/formaters/utils.py
requirements/requirements.txt