# Runtime dependencies for the microbiome signal-classification package.
# Pins left unpinned on purpose: torch/CUDA compatibility is host-specific, so
# the version floor is stated and the resolver is left to choose the build that
# matches the local CUDA toolkit (see README, Installation).

numpy>=1.23
scipy>=1.9
pandas>=1.5
h5py>=3.7
torch>=2.0
tqdm>=4.64
toml>=0.10
scikit-learn>=1.1
matplotlib>=3.6
seaborn>=0.12
biopython>=1.80
numba>=0.57
plotnine>=0.12
ont-fast5-api>=4.1
ont-bonito>=0.7