Metadata-Version: 2.1
Name: ambio
Version: 0.3.2
Summary: A lightweight Bioinformatics library
Home-page: https://github.com/albertomosconi/ambio
Author: Alberto Mosconi
Author-email: albertomaria.mosconi@gmail.com
License: UNKNOWN
Project-URL: Bug Tracker, https://github.com/albertomosconi/ambio/issues
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Natural Language :: English
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.6
Description-Content-Type: text/markdown

# Ambio

A light-weight bioinformatics library written in Python.

## Installation

Run the following command in a terminal to install:

```bash
$ pip install ambio
```

## Usage

You can import the `distance` module to calculate the edit distance between two strings of your choice, and get the table used for this computation.

```python
from ambio.distance import editDistance, generateEditDistanceTable

# get the edit distance between the two strings
print(editDistance("sunday", "saturday"))

# get the table with all the edit
# distances between the possible substrings
print(generateEditDistanceTable("sunday", "saturday"))
```

## Development

To install `ambio`, along with the tools you need to develop and run tests, run the following command:

```bash
$ pip install -e .[dev]
```


