mkdir -p 00-reads

cd 00-reads; cat ../samples_id.txt | xargs -I % echo "ln -s ../../RAW/%_*R1*.fastq.gz %_R1.fastq.gz" | bash; cd -
cd 00-reads; cat ../samples_id.txt | xargs -I % echo "ln -s ../../RAW/%_*R2*.fastq.gz %_R2.fastq.gz" | bash; cd -

mv ANALYSIS01_CHEWBBACA "$(date '+%Y%m%d')_ANALYSIS03_CHEWBBACA"