run rutile-fixed-opus-1
transcript /Users/yue/.claude/projects/-Users-yue-rietx-agent-runs-2026-10-01-wp1504-figure-work-rutile-fixed-opus-1/5dedc0d5-0359-49c4-8a44-7c008c6499f5.jsonl

   #  offset    dur    chars     tool       head
   1     2.1    0.0       22     Skill      skill
   2     4.1    0.1     7341     Bash       cat .claude/skills/rietx/references/api-figure.md; ls; cat rutile.cif
   3     7.6    0.8      915     Bash       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/venvs/fixed/bin/python -c "
   4    10.5    0.0    36284     Read       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/rutile-fixed-opus-1/draft.png
   5    14.7    0.9      180     Bash       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/venvs/fixed/bin/python -c "

5 tool calls (3 Bash, 1 Skill, 1 Read), 0 errored
6 API calls, 0.4 min wall, 0.15 M cache-read, 23 k cache-write, 1 k output, mean context 29 k
models: claude-opus-5-5 ×6

0 traced interpreter starts, 4 traced calls
refinement 0.0 s in 0 fit calls (0.0% of wall)
per-process floor 0.0 s of 1.4 s (0.0%)
    build                                 2      0.0 s [bond_tolerance, probability]
    render_structure                      2      0.3 s [path, polyhedra, size, view, view=c, polyhedra=True]
