run nac-after-sonnet-1
transcript /Users/yue/.claude/projects/-Users-yue-rietx-agent-runs-2026-10-01-wp1504-figure-work-nac-after-sonnet-1/5490399a-0f98-482f-a171-3a3b9470bbd9.jsonl

   #  offset    dur    chars     tool       head
   1     1.5    0.0       22     Skill      skill
   2     1.8    0.2      578     Bash       ls; head -50 nac.cif
   3     3.4    0.0     6566     Bash       cat .claude/skills/rietx/references/api-figure.md
   4     6.0    6.4     2737     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; cat > d
   5    16.0    4.2     1421     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; cat > d
   6    23.5    4.4      893     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; sed -i 
   7    23.9    4.1   208696     Read       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1/figure.png
   8    32.5    2.8      197     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; cat > d
   9    39.3    4.5      259     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; cat >> 
  10    39.7    4.2   176908     Read       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1/figure.png
  11    47.1    6.0      243     Bash       cd /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1; cat >> 
  12    47.4    5.7   168912     Read       /Users/yue/rietx-agent-runs/2026-10-01-wp1504-figure/work/nac-after-sonnet-1/figure.png

12 tool calls (8 Bash, 3 Read, 1 Skill), 0 errored
9 API calls, 0.9 min wall, 0.26 M cache-read, 29 k cache-write, 3 k output, mean context 33 k
models: claude-sonnet-5-5 ×9

0 traced interpreter starts, 30 traced calls
refinement 0.0 s in 0 fit calls (0.0% of wall)
per-process floor 0.0 s of 24.4 s (0.0%)
    build                                12      0.6 s [max_atoms, bond_tolerance, centres, disorder, ligands, probability]
    keep                                  5      0.0 s [complete, complete=True]
    render_structure                      5      4.5 s [path, polyhedra, size, view, view=auto, polyhedra=True]
    select                                8      0.0 s [element]
