Metadata-Version: 2.1
Name: anndata
Version: 0.9.0
Summary: Annotated data.
Author: Philipp Angerer, Alex Wolf, Isaac Virshup, Sergei Rybakov
Maintainer-email: Isaac Virshup <ivirshup@gmail.com>, Philipp Angerer <philipp.angerer@helmholtz-muenchen.de>, Alex Wolf <f.alex.wolf@gmx.de>
Requires-Python: >=3.8
Description-Content-Type: text/markdown
Classifier: License :: OSI Approved :: BSD License
Classifier: Environment :: Console
Classifier: Framework :: Jupyter
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
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Project-URL: Documentation, https://anndata.readthedocs.io/
Project-URL: Home-page, https://github.com/scverse/anndata
Project-URL: Source, https://github.com/scverse/anndata
Provides-Extra: dev
Provides-Extra: doc
Provides-Extra: test

[![Build Status](https://dev.azure.com/scverse/anndata/_apis/build/status/scverse.anndata?branchName=main)](https://dev.azure.com/scverse/anndata/_build)
[![Conda](https://img.shields.io/conda/vn/conda-forge/anndata.svg)](https://anaconda.org/conda-forge/anndata)
[![Coverage](https://codecov.io/gh/scverse/anndata/branch/main/graph/badge.svg?token=IN1mJN1Wi8)](https://codecov.io/gh/scverse/anndata)
[![Docs](https://readthedocs.com/projects/icb-anndata/badge/?version=latest)](https://anndata.readthedocs.io)
[![PyPI](https://img.shields.io/pypi/v/anndata.svg)](https://pypi.org/project/anndata)
[![PyPIDownloadsMonth](https://img.shields.io/pypi/dm/scanpy?logo=PyPI&color=blue)](https://pypi.org/project/anndata)
[![PyPIDownloadsTotal](https://pepy.tech/badge/anndata)](https://pepy.tech/project/anndata)
[![Stars](https://img.shields.io/github/stars/scverse/anndata?logo=GitHub&color=yellow)](https://github.com/scverse/anndata/stargazers)

```{image} https://raw.githubusercontent.com/scverse/anndata/main/docs/_static/img/anndata_schema.svg
:align: right
:width: 350px
```

# anndata - Annotated data

anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray. anndata offers a broad range of computationally efficient features including, among others, sparse data support, lazy operations, and a PyTorch interface.

- Discuss development on [GitHub](https://github.com/scverse/anndata).
- Read the [documentation](https://anndata.readthedocs.io).
- Ask questions on the [scverse Discourse](https://discourse.scverse.org).
- Install via `pip install anndata` or `conda install anndata -c conda-forge`.
- Consider citing the [anndata paper](https://doi.org/10.1101/2021.12.16.473007).
- See [Scanpy's documentation](https://scanpy.readthedocs.io/) for usage
  related to single cell data. anndata was initially built for Scanpy.

