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examples/claimgate_audit_biomedical_toy.py
examples/claimgate_audit_hard_experiment_01.py
examples/claimgate_biomedical_worksheet.py
examples/claimgate_risk_bar.py
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examples/diversity_metrics.py
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examples/genesis_claim_downgrade_rules.py
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src/codontrace/swarm/mqtt.py
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src/codontrace/swarm/protocol.py
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tests/science_gates/test_replay_integrity_resolve_class_path_validation.py
tests/science_gates/test_scientific_claim_gate.py
tests/science_gates/test_scientific_integrity_patch.py
tests/science_gates/test_scientific_protocol_executed_false_for_metadata_only_pseudo_evidence.py
tests/science_gates/test_statistical_report_bootstrap_ci.py
tests/science_gates/test_strong_library_phase1_descriptor_benchmark_manifest.py
tests/science_gates/test_strong_library_phase1_fitness_qd_rng.py
tests/science_gates/test_strong_library_phase1_source_map.py
tests/science_gates/test_strong_library_phase2_adf_macro.py
tests/science_gates/test_strong_library_phase2_claim_manifest.py
tests/science_gates/test_strong_library_phase2_contribution_innovation.py
tests/science_gates/test_strong_library_phase2_event_oee_translation.py
tests/science_gates/test_strong_library_phase2_runtime_completion.py
tests/science_gates/test_strong_library_phase2_variable_genome.py
tests/science_gates/test_substrate_runtime_bridge.py
tests/universal/test_mention_span_matrix.py
tests/universal/test_motor_quality_matrix.py
tests/universal/test_population_parameter_matrix.py
tests/universal/test_replay_parameter_matrix.py
tools/audit_closure_evidence.py
tools/audit_evidence_consistency.py
tools/audit_examples_integration.py
tools/audit_genesis_references.py
tools/audit_package_hygiene.py
tools/audit_release_zip.py
tools/audit_runtime_wiring.py
tools/build_baic_docx.py
tools/build_baic_en_docx.py
tools/build_clean_release_zip.py
tools/check_core_boundary.py
tools/export_biomedical_study.py
tools/export_defect_grid.py
tools/export_ladder_validation.py
tools/export_risk_bar.py