.gitignore
.readthedocs.yaml
LICENSE
README.md
dev-requirements.txt
reinstall.sh
requirements.txt
setup.py
Starfysh.egg-info/PKG-INFO
Starfysh.egg-info/SOURCES.txt
Starfysh.egg-info/dependency_links.txt
Starfysh.egg-info/not-zip-safe
Starfysh.egg-info/requires.txt
Starfysh.egg-info/top_level.txt
data/README.md
data/full_sigs.csv
data/tnbc_signature.csv
docs/Makefile
docs/make.bat
docs/source/conf.py
docs/source/index.rst
docs/source/installation.rst
docs/source/intro.rst
docs/source/starfysh.rst
docs/source/notebooks/Starfysh_tutorial_real.ipynb
docs/source/notebooks/Starfysh_tutorial_simulation.ipynb
docs/source/notebooks/update_tutorial.sh
figure/github_figure_1.png
figure/github_figure_2.png
figure/logo.png
notebooks/Starfysh_tutorial_real.ipynb
notebooks/Starfysh_tutorial_simulation.ipynb
notebooks/generate_image.ipynb
notebooks/slideseq_starfysh_tutorial_on_later.ipynb
starfysh/AA.py
starfysh/__init__.py
starfysh/dataloader.py
starfysh/gener_img.py
starfysh/plot_utils.py
starfysh/post_analysis.py
starfysh/starfysh.py
starfysh/utils.py