Metadata-Version: 2.1
Name: dgenome
Version: 1.1.7a3
Summary: UNKNOWN
Home-page: https://gitlab.com/r78v10a07/dgenome
Maintainer: Vera Alvarez, Roberto
Maintainer-email: veraalva@ncbi.nlm.nih.gov
License: Public Domain
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Environment :: Web Environment
Classifier: Framework :: Django :: 2.1
Classifier: Intended Audience :: Science/Research
Classifier: License :: Public Domain
Classifier: Natural Language :: English
Classifier: Operating System :: Unix
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Dist: uWSGI (~=2.0.17)
Requires-Dist: Django (~=2.1)
Requires-Dist: django-appconf (~=1.0)
Requires-Dist: django-compressor (~=2.2)
Requires-Dist: django-filter (~=2.1)
Requires-Dist: djangorestframework (~=3.9)
Requires-Dist: settings-overrider (~=0.5)
Requires-Dist: urllib3 (~=1.24)
Requires-Dist: python-gitlab (~=1.7)
Requires-Dist: numpy (~=1.16)
Requires-Dist: pandas (~=0.24)


dgenome
-----------

Dgenome is a Django app which handle the genome coordinates 

Quick start
-----------

1. Add "dgenome" to your INSTALLED_APPS setting like this::

    INSTALLED_APPS = [
        ...
        'dgenome',
    ]

2. Include the dgenome URLconf in your project urls.py like this::

    url(r'^dgenome/', include((dgenome.urls, 'dgenome'), namespace='dgenome')),

3. Run `python manage.py makemigrations dgenome` to create the dgenome models.

4. Run `python manage.py migrate` to create the dgenome models.

5. Insert the genomic data using the UCSC GTF file and the script: bin/load_genome_ucsc.py



